RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SULT1C2O00338 296 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 AQP7O14520 342 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 TSPAN12O95859 305 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 TGM6O95932 706 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 RPS27P42677 84 aaKnown RBP12.36□□□□□ -0.43
GPC6-201ENST00000377047 GPR12P47775 334 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 OR2A2Q6IF42 318 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 PRSS35Q8N3Z0 413 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 OR1S2Q8NGQ3 325 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 ZNF486Q96H40 463 aaPredicted RBP12.36□□□□□ -0.43
GPC6-201ENST00000377047 SPACA5Q96QH8 159 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 POFUT1Q9H488 388 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 CHRM2P08172 466 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 NPBWR1P48145 328 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 GABRA4P48169 554 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 CCR6P51684 374 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 IAH1Q2TAA2 248 aaPredicted RBP12.36□□□□□ -0.43
GPC6-201ENST00000377047 OR8G2PQ6IF36 304 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 NLRC3Q7RTR2 1065 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 ADGRF3Q8IZF5 1079 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 YIF1AO95070 293 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 SNRNP70P08621 437 aaKnown RBP12.36□□□□□ -0.43
GPC6-201ENST00000377047 EPHA8P29322 1005 aaPredicted RBP12.36□□□□□ -0.43
GPC6-201ENST00000377047 SUB1P53999 127 aaKnown RBP eCLIP12.36□□□□□ -0.43
GPC6-201ENST00000377047 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.36□□□□□ -0.43
GPC6-201ENST00000377047 OR2B11Q5JQS5 317 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
GPC6-201ENST00000377047 HABP2Q14520 560 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 TMPRSS7Q7RTY8 843 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 SMAP2Q8WU79 429 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 MRGPRX3Q96LB0 322 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 CRISPLD2Q9H0B8 497 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 IGHV1OR21-1A0A087WYE8 117 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 A0A0D9SG52 128 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 CRYM-AS1A6NIL9 109 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 SULT1B1O43704 296 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 TMEM215Q68D42 235 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ZNF626Q68DY1 528 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 RFPL4BQ6ZWI9 263 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 CMTM2Q8TAZ6 248 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ALKBH3Q96Q83 286 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 PRRX2Q99811 253 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ZNF71Q9NQZ8 489 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 POM121CA8CG34 1229 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ATP1B1P05026 303 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 MC2RQ01718 297 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 TLE4Q04727 773 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 LSRQ86X29 649 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 FBXL14Q8N1E6 418 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 LIN37Q96GY3 246 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 VN1R1Q9GZP7 353 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 GPATCH2Q9NW75 528 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 CXorf51AA0A1B0GTR3 108 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 SRP9P49458 86 aaKnown RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 SUMO3P55854 103 aaPredicted RBP12.35□□□□□ -0.43
GPC6-201ENST00000377047 OR52H1Q8NGJ2 320 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 OR1J1Q8NGS3 322 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 NANPQ8TBE9 248 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ARPC5LQ9BPX5 153 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ATPIF1Q9UII2 106 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 CDAP32320 146 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 DIO1P49895 249 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 ANKRD34AQ69YU3 496 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 NRARPQ7Z6K4 114 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 LGI3Q8N145 548 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 TAS2R5Q9NYW4 299 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 SLC23A1Q9UHI7 598 aa12.35□□□□□ -0.43
GPC6-201ENST00000377047 MAGEB4O15481 346 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 SPRY3O43610 288 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 CELA2BP08218 269 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 ABCD3P28288 659 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 RTL8BQ17RB0 113 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 KIRREL2Q6UWL6 708 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 AKR7LQ8NHP1 331 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 TNFRSF12AQ9NP84 129 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 ZNF705FA8MVS1 300 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 ZNF705DP0CH99 300 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 ZNF705BP0CI00 300 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 HAAOP46952 286 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 NXPH1P58417 271 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 AGERQ15109 404 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 ELFN2Q5R3F8 820 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 C1orf53Q5VUE5 145 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 CCDC71Q8IV32 467 aaPredicted RBP12.34□□□□□ -0.43
GPC6-201ENST00000377047 PLPP5Q8NEB5 264 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 C20orf85Q9H1P6 137 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 BCL2L10Q9HD36 194 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 CHST2Q9Y4C5 530 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 LIPAP38571 399 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 EGR3Q06889 387 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 GCNT2Q8N0V5 402 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 NOXO1Q8NFA2 376 aa12.34□□□□□ -0.43
GPC6-201ENST00000377047 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms