RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ZNF181Q2M3W8 571 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 SLC36A3Q495N2 470 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 AWAT1Q58HT5 328 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 TMEM255AQ5JRV8 349 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 C1orf94Q6P1W5 598 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 TBPL2Q6SJ96 375 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 ZNF771Q7L3S4 317 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-204ENST00000376643 DOK3Q7L591 496 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 JAZF1Q86VZ6 243 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 POU5F2Q8N7G0 328 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 DEFB108BQ8NET1 73 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 OR8G5Q8NG78 346 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 SLC7A13Q8TCU3 470 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 ERGIC1Q969X5 290 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 FAM46AQ96IP4 442 aaKnown RBP12.43□□□□□ -0.42
HDAC6-204ENST00000376643 MIOXQ9UGB7 285 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 STARD10Q9Y365 291 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 INSIG2Q9Y5U4 225 aa12.43□□□□□ -0.42
HDAC6-204ENST00000376643 F5H0A9 414 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-204ENST00000376643 TMEM178BH3BS89 294 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 NME4O00746 187 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 SOCS2O14508 198 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 PTP4A3O75365 173 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 RENP00797 406 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 HKR1P10072 659 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 RPS2P15880 293 aaKnown RBP12.42□□□□□ -0.42
HDAC6-204ENST00000376643 PRTN3P24158 256 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 ZFP36P26651 326 aaKnown RBP12.42□□□□□ -0.42
HDAC6-204ENST00000376643 GSK3BP49841 420 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 NUDT2P50583 147 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 MMP16P51512 607 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 MALLQ13021 153 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 ZMYND11Q15326 602 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 CGB2Q6NT52 195 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 SMARCD3Q6STE5 483 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 ZDHHC22Q8N966 263 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 DVL3Q92997 716 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-204ENST00000376643 SLC25A28Q96A46 364 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 SSBP3Q9BWW4 388 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-204ENST00000376643 MS4A7Q9GZW8 240 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-204ENST00000376643 SLC22A4Q9H015 551 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 GCM1Q9NP62 436 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
HDAC6-204ENST00000376643 COA3Q9Y2R0 106 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-204ENST00000376643 UNC119BA6NIH7 251 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 IQCF6A8MYZ5 107 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 CLDN34H7C241 214 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 SASH3O75995 380 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 SCG5P05408 212 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 SLC6A6P31641 620 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 OMPP47874 163 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 CENPAP49450 140 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 GNB2P62879 340 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 KCNJ8Q15842 424 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 CCDC92Q53HC0 331 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-204ENST00000376643 C8orf82Q6P1X6 216 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-204ENST00000376643 Q6ZR03 302 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 CELF2-AS1Q8N7Q2 184 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 OR8B3Q8NGG8 313 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 OR11L1Q8NGX0 322 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 MEGF10Q96KG7 1140 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 OR8B2Q96RD0 313 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 SIGLEC11Q96RL6 698 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 CDADC1Q9BWV3 514 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 NUAK2Q9H093 628 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 PTTG3PQ9NZH4 202 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 NDUFAF4Q9P032 175 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 KIF17Q9P2E2 1029 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 ABCD2Q9UBJ2 740 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 PPIAL4AQ9Y536 164 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 IER3IP1Q9Y5U9 82 aa12.41□□□□□ -0.42
HDAC6-204ENST00000376643 CEACAM18A8MTB9 384 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 ARPC3O15145 178 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 RER1O15258 196 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 IDH3BO43837 385 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 NOS3P29474 1203 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 RAD23AP54725 363 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 BPIFB3P59826 476 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 IL13RA1P78552 427 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 SF3A3Q12874 501 aaKnown RBP eCLIP12.4□□□□□ -0.425e-7■■■■□ 23.7
HDAC6-204ENST00000376643 COX10Q12887 443 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 BAMBIQ13145 260 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 OR5AS1Q8N127 324 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 SIGLECL1Q8N7X8 197 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 FANK1Q8TC84 345 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 C22orf15Q8WYQ4 148 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 NEIL1Q96FI4 390 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-204ENST00000376643 SLC30A2Q9BRI3 323 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 ZNF747Q9BV97 191 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 MED4Q9NPJ6 270 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 TRIM36Q9NQ86 728 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 MMP26Q9NRE1 261 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 DCAF13Q9NV06 445 aaKnown RBP12.4□□□□□ -0.42
HDAC6-204ENST00000376643 TMEM100Q9NV29 134 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 KCNG2Q9UJ96 466 aa12.4□□□□□ -0.42
HDAC6-204ENST00000376643 POM121CA8CG34 1229 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 WNT2P09544 360 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms