RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 THOC3Q96J01 351 aaKnown RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 C3orf30Q96M34 536 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 PTPRDP23468 1912 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 SOD1P00441 154 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 ALDOCP09972 364 aaKnown RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 NKX2-1P43699 371 aaPredicted RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 SMN1Q16637 294 aaKnown RBP11.43□□□□□ -0.58
VPS13A-204ENST00000376634 RLN3Q8WXF3 142 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 SMIM12Q96EX1 92 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 COMMD5Q9GZQ3 224 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 CHST8Q9H2A9 424 aa11.43□□□□□ -0.58
VPS13A-204ENST00000376634 TRDV1A0A1B0GX56 115 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 H3BNC9 293 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 DGAT2L6Q6ZPD8 337 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 OR51S1Q8NGJ8 323 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 OLIG1Q8TAK6 271 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF583Q96ND8 569 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 OPALINQ96PE5 141 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
VPS13A-204ENST00000376634 PARP12Q9H0J9 701 aaKnown RBP11.42□□□□□ -0.58
VPS13A-204ENST00000376634 PRSS16Q9NQE7 514 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SLC10A3P09131 477 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 FAM26DQ5JW98 314 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM123Q8N131 208 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 OR10G3Q8NGC4 313 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 PHOSPHO2Q8TCD6 241 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF384Q8TF68 577 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 LYRM4Q9HD34 91 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 LAMP3Q9UQV4 416 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 PLCE1Q9P212 2302 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 TAAR5O14804 337 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SLC35E2P0CK97 266 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 TBXA2RP21731 343 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 TP53INP2Q8IXH6 220 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 ATP23Q9Y6H3 246 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 A0A1B0GWA3 101 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 COX7A2P2O60397 106 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 TCRBP04435 133 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 RD3LP0DJH9 198 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 PGBD5Q8N414 524 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 RHOXF1Q8NHV9 184 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 ARID2Q68CP9 1835 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 A0A1B0GVG6 124 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 GPR37O15354 613 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SLC25A6P12236 298 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SLC6A11P48066 632 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 CD276Q5ZPR3 534 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM40Q8WWA1 233 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 FLVCR1Q9Y5Y0 555 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 ZNF252P-AS1Q0IIN9 211 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 STACQ99469 402 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 CTDSP1Q9GZU7 261 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SNX11Q9Y5W9 270 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 C5orf49A4QMS7 147 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SYT5O00445 386 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 PRRG2O14669 202 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 GJB3O75712 270 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 CNMDO75829 334 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 C1SP09871 688 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 ALOX5APP20292 161 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 GNPNAT1Q96EK6 184 aaPredicted RBP11.42□□□□□ -0.58
VPS13A-204ENST00000376634 IP6K3Q96PC2 410 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 IER2Q9BTL4 223 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 DHRS4Q9BTZ2 278 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 CDCP1Q9H5V8 836 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 TIMM9Q9Y5J7 89 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 DAPP51397 102 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SIX1Q15475 284 aaPredicted RBP11.42□□□□□ -0.58
VPS13A-204ENST00000376634 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 MAML2Q8IZL2 1156 aaPredicted RBP11.42□□□□□ -0.58
VPS13A-204ENST00000376634 UCK1Q9HA47 277 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 SLAMF8Q9P0V8 285 aa11.42□□□□□ -0.58
VPS13A-204ENST00000376634 GFRA2O00451 464 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 FPR3P25089 353 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 OR2B8PP59922 312 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 PCNPQ8WW12 178 aaKnown RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 ZDHHC11Q9H8X9 412 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 FBP1P09467 338 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 KRTDAPP60985 99 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 TOR2AQ5JU69 321 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 CMTM4Q8IZR5 234 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 APEHP13798 732 aaKnown RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 SLC17A1Q14916 467 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 TRNP1Q6NT89 227 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 GPR32P1Q8NGA4 272 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 BANF2Q9H503 90 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 PSORS1C1Q9UIG5 152 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 DIMT1Q9UNQ2 313 aaKnown RBP11.41□□□□□ -0.58
VPS13A-204ENST00000376634 SCN7AQ01118 1682 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 FAM166BA8MTA8 275 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 PTBP1P26599 531 aaKnown RBP eCLIP11.41□□□□□ -0.583e-7■■■■■ 27.3
VPS13A-204ENST00000376634 OR1D5P58170 312 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 DOC2BQ14184 412 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 TMEM64Q6YI46 380 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 LOC102723971A0A1B0GUV8 181 aa11.41□□□□□ -0.58
VPS13A-204ENST00000376634 TPPP2P59282 170 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms