RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 AKR1C3P42330 323 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 EXT1Q16394 746 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 TAF9Q16594 264 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 SYT14P1Q58G82 188 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 PXDC1Q5TGL8 231 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 SLC51BQ86UW2 128 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 C1orf87Q8N0U7 546 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 MS4A6EQ96DS6 147 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 SH2D1BO14796 132 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 ICMTO60725 284 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 INSM1Q01101 510 aaPredicted RBP12.49□□□□□ -0.41
COL4A1-201ENST00000375820 DOC2BQ14184 412 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 C5orf46Q6UWT4 87 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 NLRC3Q7RTR2 1065 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 PRSS35Q8N3Z0 413 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 OR6K3Q8NGY3 331 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 WBP2Q969T9 261 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 SLC22A13Q9Y226 551 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 SLC17A4Q9Y2C5 497 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 MYH9P35579 1960 aaKnown RBP12.49□□□□□ -0.41
COL4A1-201ENST00000375820 A0A0A6YYJ9 748 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 A0A1W2PR80 420 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 ASCL1P50553 236 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 ZXDAP98168 799 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 LAIR1Q6GTX8 287 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 TFAP2EQ6VUC0 442 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 DOK3Q7L591 496 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
COL4A1-201ENST00000375820 B3GALT5Q9Y2C3 310 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 MMACHCQ9Y4U1 282 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 CT45A10P0DMU9 189 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 OR52B4Q8NGK2 314 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 CORINQ9Y5Q5 1042 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 PIAS2O75928 621 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 SUB1P53999 127 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL4A1-201ENST00000375820 IHHQ14623 411 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 LRRTM1Q86UE6 522 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 CDC20BQ86Y33 519 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 OR2AE1Q8NHA4 323 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 UBTD2Q8WUN7 234 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 AKR1E2Q96JD6 320 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
COL4A1-201ENST00000375820 CTU2Q2VPK5 515 aaKnown RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 NANOGP1Q8N7R0 232 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 MRPS24Q96EL2 167 aaKnown RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 EVA1AQ9H8M9 152 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 NIT2Q9NQR4 276 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 TRDV1A0A1B0GX56 115 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 CD80P33681 288 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 GPR32P1Q8NGA4 272 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 SPPL3Q8TCT6 385 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 MBOAT4Q96T53 435 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 GPR171O14626 319 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 MT-ND4LP03901 98 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 CD27P26842 260 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 FCGR2CP31995 323 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 HAAOP46952 286 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 SHHQ15465 462 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 ETFBKMTQ8IXQ9 262 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 DHRS9Q9BPW9 319 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 KIR3DX1Q9H7L2 352 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 C12orf10Q9HB07 376 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 IDSB3KWA1 339 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 PRRG2O14669 202 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 HYAL3O43820 417 aaPredicted RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 CXCL13O43927 109 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 GLAP06280 429 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 B4GALT1P15291 398 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 MPGP29372 298 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 SLC19A1P41440 591 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 PGFP49763 221 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 CCR9P51686 369 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 OR13C8Q8NGS7 320 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 SDF2Q99470 211 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 ISG20L2Q9H9L3 353 aaKnown RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 KLK4Q9Y5K2 254 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 MN1Q10571 1320 aaPredicted RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 SCO1O75880 301 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 TNFSF15O95150 251 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 HRH1P35367 487 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 Q1RN00 199 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
COL4A1-201ENST00000375820 VN1R2Q8NFZ6 395 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 OPALINQ96PE5 141 aa12.48□□□□□ -0.41
COL4A1-201ENST00000375820 PRRT4C9JH25 899 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 H3BP45 60 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 SPINK2P20155 84 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 RAB35Q15286 201 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 FAM96BQ9Y3D0 163 aa12.47□□□□□ -0.41
COL4A1-201ENST00000375820 ASB1Q9Y576 335 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms