RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 GAR1Q9NY12 217 aaKnown RBP13.06□□□□□ -0.32
TRAF1-201ENST00000373887 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
TRAF1-201ENST00000373887 ETV1P50549 477 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 SIAEQ9HAT2 523 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 CHRNA9Q9UGM1 479 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 NTNG1Q9Y2I2 539 aa13.06□□□□□ -0.32
TRAF1-201ENST00000373887 LTBP4Q8N2S1 1624 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 DBX1A6NMT0 343 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
TRAF1-201ENST00000373887 FABP1P07148 127 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 GUSBP08236 651 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 MPGP29372 298 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 TRIM23P36406 574 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 OR2B8PP59922 312 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 SEMA6DQ8NFY4 1073 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 UCN3Q969E3 161 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 LYSMD1Q96S90 227 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 FBXL4Q9UKA2 621 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 PAPPA2Q9BXP8 1791 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 ADH4P08319 380 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 ALOX5APP20292 161 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 CCR5P51681 352 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
TRAF1-201ENST00000373887 MISPQ8IVT2 679 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 LILRA2Q8N149 483 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 MS4A6EQ96DS6 147 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 FAM53CQ9NYF3 392 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 LOXHD1Q8IVV2 1947 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 MN1Q10571 1320 aaPredicted RBP13.05□□□□□ -0.32
TRAF1-201ENST00000373887 SCGB1C2P0DMR2 95 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 GLB1P16278 677 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 DTYMKP23919 212 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 TMEM268Q5VZI3 342 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 DEFB108BQ8NET1 73 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 IL21Q9HBE4 155 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 M0R1B8 84 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 PRTGQ2VWP7 1150 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 UQCC2Q9BRT2 126 aa13.05□□□□□ -0.32
TRAF1-201ENST00000373887 DIMT1Q9UNQ2 313 aaKnown RBP13.05□□□□□ -0.32
TRAF1-201ENST00000373887 G3V3Q6 166 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 H7BYZ3 331 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 KIR2DL3P43628 341 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 ALKBH6Q3KRA9 238 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 NLRC3Q7RTR2 1065 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 OR13D1Q8NGV5 346 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF2Q9BSG1 426 aaPredicted RBP13.04□□□□□ -0.32
TRAF1-201ENST00000373887 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 SLC5A10A0PJK1 596 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 OR7C2O60412 319 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 OR2J2O76002 312 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 ATP1B1P05026 303 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 MPLP40238 635 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 KRTDAPP60985 99 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 PXDC1Q5TGL8 231 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 OTUD1Q5VV17 481 aaPredicted RBP13.04□□□□□ -0.32
TRAF1-201ENST00000373887 LRRC61Q9BV99 259 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 PLA2G12AQ9BZM1 189 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 FAM221AA4D161 298 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 ECI1P42126 302 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 L3MBTL4Q8NA19 623 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 OR6K3Q8NGY3 331 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 DDOQ99489 341 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 KCNG2Q9UJ96 466 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF835Q9Y2P0 537 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 A0A096LPE4 126 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 A0A1W2PPZ6 126 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 TCRBV5S1A1TA0A578 114 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 SLC25A6P12236 298 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 UBE2MP61081 183 aaKnown RBP13.04□□□□□ -0.32
TRAF1-201ENST00000373887 DUSP5Q16690 384 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 GUSBP11Q6P575 273 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 OR5M9Q8NGP3 310 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 UBTD2Q8WUN7 234 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 SLC7A6Q92536 515 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 P2RY12Q9H244 342 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 FGF17O60258 216 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 B3GALNT1O75752 331 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 Q6ZSR9 355 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 CISD2Q8N5K1 135 aaKnown RBP13.04□□□□□ -0.32
TRAF1-201ENST00000373887 OR2AE1Q8NHA4 323 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 RTL8AQ9BWD3 113 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 ACOXLQ9NUZ1 547 aa13.04□□□□□ -0.32
TRAF1-201ENST00000373887 MBTPS2O43462 519 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 G0S2P27469 103 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF620Q6ZNG0 422 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 C1orf210Q8IVY1 113 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 NKAIN3Q8N8D7 197 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 OR2M7Q8NG81 312 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 OR13C8Q8NGS7 320 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 CHST8Q9H2A9 424 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 KPTNQ9Y664 436 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 SH2D7A6NKC9 451 aaPredicted RBP13.03□□□□□ -0.32
TRAF1-201ENST00000373887 SEMG1P04279 462 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 GPR12P47775 334 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 TEKQ02763 1124 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 Q6ZNB5 142 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms