RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SIAH3Q8IW03 269 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 SPICQ8N5J4 248 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 PNLDC1Q8NA58 520 aaKnown RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 TMEM229BQ8NBD8 167 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 PLPP7Q8NBV4 271 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 NLGN4YQ8NFZ3 816 aaPredicted RBP7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 OR13C5Q8NGS8 318 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 OR5H6Q8NGV6 325 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 CPT1CQ8TCG5 803 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 C11orf40Q8WZ69 217 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 SPTSSAQ969W0 71 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 TMEM45BQ96B21 275 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 UPRTQ96BW1 309 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 SLC25A38Q96DW6 304 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 RNF31Q96EP0 1072 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 FAM173AQ9BQD7 235 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 PBOV1Q9GZY1 135 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 MMP28Q9H239 520 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ZFP64Q9NPA5 681 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 MALT1Q9UDY8 824 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 POLR1DQ9Y2S0 133 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 ALG5Q9Y673 324 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 RP1P56715 2156 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 GON4LQ3T8J9 2241 aa7.75□□□□□ -1.17
SNRNP40-202ENST00000373720 LOC107986453A0A1B0GWG9 222 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 UBE2QL1A1L167 161 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 OR2M5A3KFT3 312 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 PRR32B1ATL7 298 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 LDLRAD4O15165 306 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 EFNA2O43921 213 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 CTAG2O75638 210 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 NDUFB6O95139 128 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 MAS1P04201 325 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 CST2P09228 141 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 QDPRP09417 244 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 HLA-DOBP13765 273 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF20P17024 532 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 CDK2P24941 298 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 GNALP38405 381 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 PI4KAP42356 2102 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 SOX2P48431 317 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 POU3F4P49335 361 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 SCRN3Q0VDG4 424 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 CAMK2DQ13557 499 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 MELKQ14680 651 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 MPPED2Q15777 294 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 PNLIPRP3Q17RR3 467 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 GSG1Q2KHT4 349 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 HYAL4Q2M3T9 481 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ACTBL2Q562R1 376 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ACER2Q5QJU3 275 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 CLVS2Q5SYC1 327 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ZBTB37Q5TC79 503 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 RAET1LQ5VY80 246 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 OR5M10Q6IEU7 315 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 OR7E24Q6IFN5 339 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 LCN10Q6JVE6 187 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 FAHD2BQ6P2I3 314 aaPredicted RBP7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF813Q6ZN06 617 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 UTS2BQ765I0 119 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 PPP1R32Q7Z5V6 425 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 LYPD6Q86Y78 171 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 NAXDQ8IW45 347 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 C20orf196Q8IYI0 205 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 BEST3Q8N1M1 668 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 TMEM105Q8N8V8 129 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 OR9K2Q8NGE7 335 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 OR6N1Q8NGY5 312 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 KCNG3Q8TAE7 436 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ZFAND1Q8TCF1 268 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 SMAP2Q8WU79 429 aaPredicted RBP7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 HSD17B8Q92506 261 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 SLC25A28Q96A46 364 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 FAHD2AQ96GK7 314 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 SFXN2Q96NB2 322 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 SCGB3A2Q96PL1 93 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 GFI1Q99684 422 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 OR51J1Q9H342 316 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF160Q9HCG1 818 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 HRASLSQ9HDD0 168 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 TMEM9BQ9NQ34 198 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 NUDT15Q9NV35 164 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 ANKRD10Q9NXR5 420 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 SCP2D1Q9UJQ7 156 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 GDF2Q9UK05 429 aaPredicted RBP7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 FBXL2Q9UKC9 423 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 EMC9Q9Y3B6 208 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 NPTNQ9Y639 398 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 TRIOBPQ9H2D6 2365 aa7.74□□□□□ -1.17
SNRNP40-202ENST00000373720 CPAMD8Q8IZJ3 1885 aa7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 TRAV8-7A0A075B6U6 113 aa7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 A0A1W2PPK0 400 aa7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 SMIM30A4D0T7 59 aa7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 DVL2O14641 736 aa7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 MAGEB4O15481 346 aaPredicted RBP7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 DHHO43323 396 aa7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 CREBL2O60519 120 aaPredicted RBP7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 ICMTO60725 284 aa7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 ZNF780AO75290 641 aaPredicted RBP7.73□□□□□ -1.17
SNRNP40-202ENST00000373720 PNPP00491 289 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms