RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 UTP23Q9BRU9 249 aaKnown RBP17.32■□□□□ 0.36
HDAC1-201ENST00000373548 ZNF416Q9BWM5 594 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 HMX3A6NHT5 357 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 CXCL13O43927 109 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 CD37P11049 281 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 HSD11B1P28845 292 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 CLDN15P56746 228 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 LSM6P62312 80 aaKnown RBP17.32■□□□□ 0.36
HDAC1-201ENST00000373548 AIMP2Q13155 320 aaKnown RBP17.32■□□□□ 0.36
HDAC1-201ENST00000373548 DEFB124Q8NES8 71 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 OR2M7Q8NG81 312 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 FAM173AQ9BQD7 235 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 HES7Q9BYE0 225 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 B3GNT4Q9C0J1 378 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 NIPAL2Q9H841 368 aa17.32■□□□□ 0.36
HDAC1-201ENST00000373548 NUFIP1Q9UHK0 495 aaKnown RBP17.32■□□□□ 0.36
HDAC1-201ENST00000373548 SULT1B1O43704 296 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 ORC5O43913 435 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 MSR1P21757 451 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 GDNFP39905 211 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 MNDAP41218 407 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 POU3F4P49335 361 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 PRKXP51817 358 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 GFRA1P56159 465 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 KLF9Q13886 244 aaPredicted RBP17.31■□□□□ 0.36
HDAC1-201ENST00000373548 TAF13Q15543 124 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 GLT8D1Q68CQ7 371 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 IL22RA1Q8N6P7 574 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 OR52I2Q8NH67 350 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 OR10D3Q8NH80 312 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 OR2V1Q8NHB1 315 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 SLC25A28Q96A46 364 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 FAM3DQ96BQ1 224 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 IP6K3Q96PC2 410 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 KCNK15Q9H427 330 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 PLEKHA1Q9HB21 404 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 ABI3Q9P2A4 366 aa17.31■□□□□ 0.36
HDAC1-201ENST00000373548 GABARAPH6UMI1 98 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 DHHO43323 396 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 TRAPPC2P0DI81 140 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 TRAPPC2BP0DI82 140 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 POU3F2P20265 443 aaPredicted RBP17.3■□□□□ 0.36
HDAC1-201ENST00000373548 EFNB2P52799 333 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 TAS2R20P59543 309 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 OR1C1Q15619 314 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 C20orf196Q8IYI0 205 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 UBASH3BQ8TF42 649 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 NABP1Q96AH0 204 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 CREB3L1Q96BA8 519 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 ZNF775Q96BV0 537 aaPredicted RBP17.3■□□□□ 0.36
HDAC1-201ENST00000373548 NELFAQ9H3P2 528 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 ZNF275Q9NSD4 429 aaPredicted RBP17.3■□□□□ 0.36
HDAC1-201ENST00000373548 PLA2G3Q9NZ20 509 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 ALG5Q9Y673 324 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 ZNF716A6NP11 495 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 PTHLHP12272 177 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 SPOCK1Q08629 439 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 ENDOGQ14249 297 aaKnown RBP17.3■□□□□ 0.36
HDAC1-201ENST00000373548 C2orf76Q3KRA6 126 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 LINC00696Q6ZRV3 163 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 ROBO4Q8WZ75 1007 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 PNPLA2Q96AD5 504 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 INTS12Q96CB8 462 aaKnown RBP17.3■□□□□ 0.36
HDAC1-201ENST00000373548 MOB1AQ9H8S9 216 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 CGGBP1Q9UFW8 167 aaPredicted RBP17.3■□□□□ 0.36
HDAC1-201ENST00000373548 CDV3Q9UKY7 258 aaKnown RBP17.3■□□□□ 0.36
HDAC1-201ENST00000373548 FLVCR1Q9Y5Y0 555 aa17.3■□□□□ 0.36
HDAC1-201ENST00000373548 LOC100289279A0A1B0GTE1 492 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 A0A1B0GTI1 187 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 MEGF11A6BM72 1044 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 INMT-MINDY4F8WBC2 141 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 SYT7O43581 403 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 HLA-DMAP28067 261 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 NTF4P34130 210 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 RFC3P40938 356 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 GUCA1AP43080 201 aaPredicted RBP17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ZNF121P58317 390 aaPredicted RBP17.29■□□□□ 0.36
HDAC1-201ENST00000373548 BIVMQ86UB2 503 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 SLC7A6Q92536 515 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 FGGYQ96C11 551 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ST6GAL2Q96JF0 529 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 RBM24Q9BX46 236 aaKnown RBP17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ULBP2Q9BZM5 246 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ZNF703Q9H7S9 590 aaPredicted RBP17.29■□□□□ 0.36
HDAC1-201ENST00000373548 CENPXA8MT69 81 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 GLSO94925 669 aaPredicted RBP17.29■□□□□ 0.36
HDAC1-201ENST00000373548 SLC2A1P11166 492 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ANOS1P23352 680 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 NUBP1P53384 320 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 TBRG1Q3YBR2 411 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 GLYATL3Q5SZD4 288 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ATAD3CQ5T2N8 411 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ABLIM2Q6H8Q1 611 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ANKRD16Q6P6B7 361 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 SULF2Q8IWU5 870 aa17.29■□□□□ 0.36
HDAC1-201ENST00000373548 ADAT3Q96EY9 351 aaPredicted RBP17.29■□□□□ 0.36
HDAC1-201ENST00000373548 RBMX2Q9Y388 322 aaKnown RBP17.29■□□□□ 0.36
HDAC1-201ENST00000373548 SPAARA0A1B0GVQ0 90 aa17.28■□□□□ 0.36
HDAC1-201ENST00000373548 DCDC2BA2VCK2 349 aa17.28■□□□□ 0.36
HDAC1-201ENST00000373548 XRCC3O43542 346 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms