RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CPT1CQ8TCG5 803 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 LIPHQ8WWY8 451 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 ZC3HAV1LQ96H79 300 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 SYT3Q9BQG1 590 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 VN1R1Q9GZP7 353 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 PRR13Q9NZ81 148 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 PUS1Q9Y606 427 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 LOC100289279A0A1B0GTE1 492 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 ICMTO60725 284 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 PRAF2O60831 178 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 CCL7P80098 99 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 CDK5Q00535 292 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 ASAH1Q13510 395 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 EDDM3AQ14507 147 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 MARCH1Q8TCQ1 289 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 TMED6Q8WW62 240 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 COX14Q96I36 57 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 PSD2Q9BQI7 771 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 ANKRD19PQ9H560 264 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 PCDHB16Q9NRJ7 776 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 FAM86C1Q9NVL1 165 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 TAS2R5Q9NYW4 299 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 FLRT3Q9NZU0 649 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 EDARQ9UNE0 448 aa8.23□□□□□ -1.09
SMARCA1-202ENST00000371122 IGKV1-8A0A0C4DH67 115 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PRSS37A4D1T9 235 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ACHEP22303 614 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ASCL1P50553 236 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 SELENOVP59797 346 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 RPS16P62249 146 aaKnown RBP8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ZNF117Q03924 483 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ZNF169Q14929 603 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 DCAF12Q5T6F0 453 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 LRRTM1Q86UE6 522 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 FJX1Q86VR8 437 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 OR2L13Q8N349 312 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 STK35Q8TDR2 534 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ASB17Q8WXJ9 295 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 WDR89Q96FK6 387 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PTTG3PQ9NZH4 202 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PATE3B3GLJ2 98 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PYCARD-AS1I3L0S3 204 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 SOX15O60248 233 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PDGFAP04085 211 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 CCL2P13500 99 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ZNF136P52737 540 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 RNF4P78317 190 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PSG6Q00889 435 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 FAM53BQ14153 422 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 SP6Q3SY56 376 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 CAMKMTQ7Z624 323 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 MISPQ8IVT2 679 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 RFLNBQ8N5W9 214 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 DEFB108BQ8NET1 73 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 OR2AE1Q8NHA4 323 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 IFI44Q8TCB0 444 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 GLTPQ9NZD2 209 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ZNF230Q9UIE0 474 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PHF1O43189 567 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 OIP5O43482 229 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 FAM157BP0CG42 384 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 CTLA4P16410 223 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 BCKDHBP21953 392 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 GZMMP51124 257 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 EFNA3P52797 238 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 SSTP61278 116 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PRICKLE4Q2TBC4 344 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 PLEKHN1Q494U1 663 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 TMEM88Q6PEY1 159 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ZFP82Q8N141 532 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 SLC22A24Q8N4F4 322 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 OR4C16Q8NGL9 310 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 ZPLD1Q8TCW7 415 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 S100PBPQ96BU1 408 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 MFRPQ9BY79 579 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 CRLF2Q9HC73 371 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 URGCP-MRPS24S4R325 110 aa8.22□□□□□ -1.09
SMARCA1-202ENST00000371122 TXNL1O43396 289 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 XRCC2O43543 280 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 SPRY1O43609 319 aaPredicted RBP8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 SRFP11831 508 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 IL9P15248 144 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 PEBP1P30086 187 aaKnown RBP8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 S100A11P31949 105 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 HRH1P35367 487 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 AKR1C3P42330 323 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 GZMKP49863 264 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 MECP2P51608 486 aaKnown RBP8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 RPS4XP62701 263 aaKnown RBP8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 SHEQ5VZ18 495 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 ANKRD16Q6P6B7 361 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 NHLRC1Q6VVB1 395 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 PSMF1Q92530 271 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 GCM1Q9NP62 436 aa8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 FGF20Q9NP95 211 aaPredicted RBP8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 SIRT4Q9Y6E7 314 aaPredicted RBP8.21□□□□□ -1.09
SMARCA1-202ENST00000371122 PTPRSQ13332 1948 aa8.21□□□□□ -1.1
SMARCA1-202ENST00000371122 A0A087WUJ7 227 aa8.21□□□□□ -1.1
SMARCA1-202ENST00000371122 A0A0B4J2E0 115 aa8.21□□□□□ -1.1
SMARCA1-202ENST00000371122 A0A1B0GX12 115 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms