RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SLC6A13Q9NSD5 602 aa17.83■□□□□ 0.44
LMO4-202ENST00000370544 XRCC2O43543 280 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 CBR3O75828 277 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 CNR1P21554 472 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 SHBQ15464 509 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 PCNPQ8WW12 178 aaKnown RBP17.82■□□□□ 0.44
LMO4-202ENST00000370544 SIGLEC11Q96RL6 698 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 HDGFL3Q9Y3E1 203 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 HRO43593 1189 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 NRASP01111 189 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 FOLR1P15328 257 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 NDUFB7P17568 137 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 ALOX5APP20292 161 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 DDOSTP39656 456 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 RFC3P40938 356 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 LGALS4P56470 323 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 DUSP2Q05923 314 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 ZNF707Q96C28 371 aaPredicted RBP17.82■□□□□ 0.44
LMO4-202ENST00000370544 JAM3Q9BX67 310 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 MFRPQ9BY79 579 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 ISG20L2Q9H9L3 353 aaKnown RBP17.82■□□□□ 0.44
LMO4-202ENST00000370544 SLC22A13Q9Y226 551 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 ASPDHA6ND91 283 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 OR10A3P58181 314 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 CLN3Q13286 438 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 HEYLQ9NQ87 328 aaPredicted RBP17.82■□□□□ 0.44
LMO4-202ENST00000370544 UFSP2Q9NUQ7 469 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 CCSO14618 274 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 CTXN2P0C2S0 81 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 OR52H1Q8NGJ2 320 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 TAAR9Q96RI9 348 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 ZNF385DQ9H6B1 395 aa17.82■□□□□ 0.44
LMO4-202ENST00000370544 FUCA1P04066 466 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 TGM4P49221 684 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 KANSL1Q7Z3B3 1105 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 OR51A4Q8NGJ6 313 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 YIPF6Q96EC8 236 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 ZNF225Q9UK10 706 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 MDFIC2A0A1B0GVS7 189 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 ZNF793Q6ZN11 406 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 GABRG1Q8N1C3 465 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 OR5H6Q8NGV6 325 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 OR51H1Q8NH63 302 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 DYNC2LI1Q8TCX1 351 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 PUS1Q9Y606 427 aaKnown RBP eCLIP17.81■□□□□ 0.44
LMO4-202ENST00000370544 ZNF705FA8MVS1 300 aaPredicted RBP17.81■□□□□ 0.44
LMO4-202ENST00000370544 ZNF705DP0CH99 300 aaPredicted RBP17.81■□□□□ 0.44
LMO4-202ENST00000370544 ZNF705BP0CI00 300 aaPredicted RBP17.81■□□□□ 0.44
LMO4-202ENST00000370544 EPHA2P29317 976 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 TMEM200AQ86VY9 491 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 HSD17B11Q8NBQ5 300 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 PXT1Q8NFP0 134 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 FBXO8Q9NRD0 319 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 GPATCH2Q9NW75 528 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 SLCO1C1Q9NYB5 712 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 A4GNTQ9UNA3 340 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 KCNE1BA0A087WTH5 132 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 EIF4EP06730 217 aaKnown RBP17.81■□□□□ 0.44
LMO4-202ENST00000370544 OTPQ5XKR4 325 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 STAC2Q6ZMT1 411 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 SEH1LQ96EE3 360 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 SPACA5Q96QH8 159 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 ADAMTS7Q9UKP4 1686 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 TMEM235A6NFC5 223 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 IFITM5A6NNB3 132 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 AGAP14A8MT82 685 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 HSBP1L1C9JCN9 74 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 SLC38A9Q8NBW4 561 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 CPEB3Q8NE35 698 aaKnown RBP17.81■□□□□ 0.44
LMO4-202ENST00000370544 GPR119Q8TDV5 335 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 ZNF2Q9BSG1 426 aaPredicted RBP17.81■□□□□ 0.44
LMO4-202ENST00000370544 ING1Q9UK53 422 aaPredicted RBP17.81■□□□□ 0.44
LMO4-202ENST00000370544 B9D1Q9UPM9 204 aa17.81■□□□□ 0.44
LMO4-202ENST00000370544 SH2D1BO14796 132 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 OR8U8P0C7N1 319 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 PCK2Q16822 640 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 HIF1ANQ9NWT6 349 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 ATPIF1Q9UII2 106 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 GDF2Q9UK05 429 aaPredicted RBP17.8■□□□□ 0.44
LMO4-202ENST00000370544 RAB27BO00194 218 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 CATSPERDQ86XM0 798 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 CMTM4Q8IZR5 234 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 NANPQ8TBE9 248 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 DSCR4P56555 118 aaPredicted RBP17.8■□□□□ 0.44
LMO4-202ENST00000370544 TMUB2Q71RG4 321 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.8■□□□□ 0.44
LMO4-202ENST00000370544 ROBO4Q8WZ75 1007 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 SLC7A6Q92536 515 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 NTN4Q9HB63 628 aa17.8■□□□□ 0.44
LMO4-202ENST00000370544 URB1O60287 2271 aaKnown RBP17.79■□□□□ 0.44
LMO4-202ENST00000370544 HES1Q14469 280 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 HMGN3Q15651 99 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 C2orf76Q3KRA6 126 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 ANKRD16Q6P6B7 361 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 OR2V1Q8NHB1 315 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 SUCNR1Q9BXA5 334 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 PLA2G12AQ9BZM1 189 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 ERVMER34-1Q9H9K5 563 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 WNT16Q9UBV4 365 aa17.79■□□□□ 0.44
LMO4-202ENST00000370544 ABCA3Q99758 1704 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms