RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 HIST2H3PS2Q5TEC6 136 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 SLC27A4Q6P1M0 643 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 C1orf94Q6P1W5 598 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 FBXW12Q6X9E4 464 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 RBMS3Q6XE24 437 aaKnown RBP13.45□□□□□ -0.26
CKS1B-202ENST00000368436 HIST2H3AQ71DI3 136 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 BCL6BQ8N143 479 aaPredicted RBP13.45□□□□□ -0.26
CKS1B-202ENST00000368436 MUC20Q8N307 709 aaPredicted RBP13.45□□□□□ -0.26
CKS1B-202ENST00000368436 C1orf147Q96MC9 270 aaPredicted RBP13.45□□□□□ -0.26
CKS1B-202ENST00000368436 MRI1Q9BV20 369 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 ZNF747Q9BV97 191 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 NUAK2Q9H093 628 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 CCDC134Q9H6E4 229 aa13.45□□□□□ -0.26
CKS1B-202ENST00000368436 CEACAM18A8MTB9 384 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 RER1O15258 196 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 WIPF1O43516 503 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 TXNDC12O95881 172 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 H1F0P07305 194 aaKnown RBP13.44□□□□□ -0.26
CKS1B-202ENST00000368436 DBHP09172 617 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 FXYD6P3P58550 94 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 PAX2Q02962 417 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 HLXQ14774 488 aaPredicted RBP13.44□□□□□ -0.26
CKS1B-202ENST00000368436 ESCO2Q56NI9 601 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 HACD2Q6Y1H2 254 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 DPY19L2P2Q6ZN68 376 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 ADCK1Q86TW2 530 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 OR5AS1Q8N127 324 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 ATG16L2Q8NAA4 619 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 OR8G5Q8NG78 346 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 OR5L1Q8NGL2 311 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 OR13G1Q8NGZ3 307 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 APOBEC3DQ96AK3 386 aaPredicted RBP13.44□□□□□ -0.26
CKS1B-202ENST00000368436 ZNF48Q96MX3 618 aaPredicted RBP13.44□□□□□ -0.26
CKS1B-202ENST00000368436 RERGLQ9H628 205 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 ZMAT3Q9HA38 289 aaKnown RBP13.44□□□□□ -0.26
CKS1B-202ENST00000368436 EFCAB1Q9HAE3 211 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 TMEM165Q9HC07 324 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 PTTG3PQ9NZH4 202 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 NDUFAF4Q9P032 175 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 LRCH1Q9Y2L9 728 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 IER3IP1Q9Y5U9 82 aa13.44□□□□□ -0.26
CKS1B-202ENST00000368436 A0A1B0GWJ7 208 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 DNAJC9-AS1A6NH13 148 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 SOCS2O14508 198 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 NDUFAB1O14561 156 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 FSTL3O95633 263 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 NCK1P16333 377 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 RHCEP18577 417 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 CD80P33681 288 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 CDKN2AP42771 156 aaKnown RBP13.43□□□□□ -0.26
CKS1B-202ENST00000368436 ZNF181Q2M3W8 571 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 OR2T2Q6IF00 324 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 GJC3Q8NFK1 279 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 ZNF420Q8TAQ5 688 aaPredicted RBP13.43□□□□□ -0.26
CKS1B-202ENST00000368436 FAM162AQ96A26 154 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 RSRC1Q96IZ7 334 aaKnown RBP13.43□□□□□ -0.26
CKS1B-202ENST00000368436 MEGF10Q96KG7 1140 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 C7orf34Q96L11 122 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 COQ7Q99807 217 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 SLC30A2Q9BRI3 323 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 FUZQ9BT04 418 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 OR5V1Q9UGF6 321 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 IL20RAQ9UHF4 553 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 RPS6KA6Q9UK32 745 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 PCDHGB1Q9Y5G3 927 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 LHFPL6Q9Y693 200 aa13.43□□□□□ -0.26
CKS1B-202ENST00000368436 TRBV4-1A0A0J9YWV2 114 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 IQCF6A8MYZ5 107 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 H0YL77 283 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 DCTN6O00399 190 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 MLNRO43193 412 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 CCDC22O60826 627 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 PPIAL4GP0DN37 164 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 SRP9P49458 86 aaKnown RBP13.42□□□□□ -0.26
CKS1B-202ENST00000368436 RPS6KA3P51812 740 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 SEC23BQ15437 767 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 RSPO1Q2MKA7 263 aaPredicted RBP13.42□□□□□ -0.26
CKS1B-202ENST00000368436 KRTAP27-1Q3LI81 207 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 PRR31Q5SQ13 230 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 PGM2L1Q6PCE3 622 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 SHISA2Q6UWI4 295 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 COLCA1Q6ZS62 124 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 OR10AD1Q8NGE0 317 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 DACT3Q96B18 629 aaPredicted RBP13.42□□□□□ -0.26
CKS1B-202ENST00000368436 DHRS1Q96LJ7 313 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 ZNF582Q96NG8 517 aaPredicted RBP13.42□□□□□ -0.26
CKS1B-202ENST00000368436 KCTD14Q9BQ13 255 aaPredicted RBP13.42□□□□□ -0.26
CKS1B-202ENST00000368436 SSBP3Q9BWW4 388 aaPredicted RBP13.42□□□□□ -0.26
CKS1B-202ENST00000368436 C1QTNF5Q9BXJ0 243 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 HDHD2Q9H0R4 259 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 ABCD2Q9UBJ2 740 aa13.42□□□□□ -0.26
CKS1B-202ENST00000368436 FAM32AQ9Y421 112 aaKnown RBP13.42□□□□□ -0.26
CKS1B-202ENST00000368436 MGAM2Q2M2H8 2515 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 IGLV1-36A0A0B4J1U3 117 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 UNC119BA6NIH7 251 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 CLDN34H7C241 214 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 TMPRSS2O15393 492 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 GPANK1O95872 356 aa13.41□□□□□ -0.26
CKS1B-202ENST00000368436 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms