RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SPACA5Q96QH8 159 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 CGGBP1Q9UFW8 167 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 RAB22AQ9UL26 194 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 RAB4BP61018 213 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 TMEM179BQ7Z7N9 219 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ST8SIA4Q92187 359 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 BCO1Q9HAY6 547 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 TAS2R3Q9NYW6 316 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ZDBF2Q9HCK1 2354 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ALG1L2C9J202 215 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 HOXB5P09067 269 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ETV1P50549 477 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF169Q14929 603 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 WDR74Q6RFH5 385 aaPredicted RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 PAQR6Q6TCH4 344 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 NLRC3Q7RTR2 1065 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 PPIL3Q9H2H8 161 aaKnown RBP10.47□□□□□ -0.73
SYNE1-204ENST00000367248 MMP25Q9NPA2 562 aa10.47□□□□□ -0.73
SYNE1-204ENST00000367248 ANKRD61A6NGH8 418 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 SRMP19623 302 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 IL3RAP26951 378 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 HTR2AP28223 471 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 CAMLGP49069 296 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 PRICKLE4Q2TBC4 344 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 CTU2Q2VPK5 515 aaKnown RBP10.46□□□□□ -0.73
SYNE1-204ENST00000367248 CEACAM16Q2WEN9 425 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 PRSS42Q7Z5A4 293 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 BBS1Q8NFJ9 593 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 RDH5Q92781 318 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF764Q96H86 408 aaPredicted RBP10.46□□□□□ -0.73
SYNE1-204ENST00000367248 BANF2Q9H503 90 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 LPAR2Q9HBW0 351 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 B9D1Q9UPM9 204 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF831Q5JPB2 1677 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 A1L4Q6 167 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 SPINT2O43291 252 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF718Q3SXZ3 478 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 OR1M1Q8NGA1 313 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 EXTL1Q92935 676 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 SPACA1Q9HBV2 294 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 TRIM64CA6NLI5 447 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 RNF212BA8MTL3 300 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 HSD17B6O14756 317 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 EML2O95834 649 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 SOD1P00441 154 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF136P52737 540 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 OR2B11Q5JQS5 317 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 DCUN1D4Q92564 292 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 MFFQ9GZY8 342 aa10.46□□□□□ -0.73
SYNE1-204ENST00000367248 LOC100289279A0A1B0GTE1 492 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 GPR137BO60478 399 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 CD79BP40259 229 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 FAM198BQ6UWH4 519 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 IDO2Q6ZQW0 420 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 SMAP2Q8WU79 429 aaPredicted RBP10.46□□□□□ -0.74
SYNE1-204ENST00000367248 TAAR8Q969N4 342 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 OPALINQ96PE5 141 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 PSD2Q9BQI7 771 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 TMEM43Q9BTV4 400 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 SLCO5A1Q9H2Y9 848 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 SHANK3Q9BYB0 1731 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 ICE1Q9Y2F5 2266 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 E9PI62 339 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 BOLA2-SMG1P6H3BVE0 249 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 HLA-AP01891 365 aaKnown RBP10.46□□□□□ -0.74
SYNE1-204ENST00000367248 ZNF74Q16587 644 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 SSX9Q7RTT3 188 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 EGFL6Q8IUX8 553 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 OR2Z1Q8NG97 314 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 KTI12Q96EK9 354 aaPredicted RBP10.46□□□□□ -0.74
SYNE1-204ENST00000367248 ING1Q9UK53 422 aaPredicted RBP10.46□□□□□ -0.74
SYNE1-204ENST00000367248 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 TIGD3Q6B0B8 471 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 DNAJC5GQ8N7S2 189 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 RND1Q92730 232 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 GVINP1Q7Z2Y8 2422 aa10.46□□□□□ -0.74
SYNE1-204ENST00000367248 IGHV5-10-1A0A0J9YXX1 117 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 TMEM82A0PJX8 343 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 SULT1C4O75897 302 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 ETV6P41212 452 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 PMPCAQ10713 525 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 EBPQ15125 230 aaKnown RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 ZCCHC14Q8WYQ9 949 aaKnown RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 SDHAF2Q9NX18 166 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 H7C1Q1 480 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 XRCC2O43543 280 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 HEPHL1Q6MZM0 1159 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 OR56B4Q8NH76 319 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 OR2B2Q9GZK3 357 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 UCK1Q9HA47 277 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 MT-CO2P00403 227 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 TMIGD3P0DMS9 266 aaPredicted RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 TAS2R20P59543 309 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 RBMS2Q15434 407 aaKnown RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 AKR1C8PQ5T2L2 129 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 OR4A16Q8NH70 328 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 A4GNTQ9UNA3 340 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 RPL23AP62750 156 aaKnown RBP10.45□□□□□ -0.74
SYNE1-204ENST00000367248 OR2A2Q6IF42 318 aa10.45□□□□□ -0.74
SYNE1-204ENST00000367248 WDR5BQ86VZ2 330 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms