RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 ZNF74Q16587 644 aa10.4□□□□□ -0.75
RD3-201ENST00000367002 MAML2Q8IZL2 1156 aaPredicted RBP10.4□□□□□ -0.75
RD3-201ENST00000367002 TP53I13Q8NBR0 393 aaPredicted RBP10.4□□□□□ -0.75
RD3-201ENST00000367002 GPR119Q8TDV5 335 aa10.4□□□□□ -0.75
RD3-201ENST00000367002 PPP1R1CQ8WVI7 109 aa10.4□□□□□ -0.75
RD3-201ENST00000367002 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.75
RD3-201ENST00000367002 S1PR5Q9H228 398 aa10.4□□□□□ -0.75
RD3-201ENST00000367002 SLC22A11Q9NSA0 550 aa10.4□□□□□ -0.75
RD3-201ENST00000367002 ZNF629Q9UEG4 869 aaPredicted RBP10.4□□□□□ -0.75
RD3-201ENST00000367002 PADI1Q9ULC6 663 aa10.4□□□□□ -0.75
RD3-201ENST00000367002 NOSIPQ9Y314 301 aaKnown RBP10.4□□□□□ -0.75
RD3-201ENST00000367002 TIMM8BQ9Y5J9 83 aaPredicted RBP10.4□□□□□ -0.75
RD3-201ENST00000367002 IGHV3-9P01782 118 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 ADAM5Q6NVV9 412 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CNEP1R1Q8N9A8 125 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 MARCH1Q8TCQ1 289 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 YIPF5Q969M3 257 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CPNE4Q96A23 557 aaPredicted RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 C3orf49Q96BT1 292 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 OCSTAMPQ9BR26 566 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 PIGQQ9BRB3 760 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 RPP25Q9BUL9 199 aaKnown RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 ZCCHC4Q9H5U6 513 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 GAREM1Q9H706 876 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 GCM1Q9NP62 436 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 MMP25Q9NPA2 562 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 OBP2BQ9NPH6 170 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 ZNF223Q9UK11 482 aaPredicted RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 TRAPPC2LQ9UL33 140 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 SCN3AQ9NY46 2000 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 SPTY2D1-AS1A0A0U1RR47 76 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CEBPZOSA8MTT3 80 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 HRH1P35367 487 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 OPRM1P35372 400 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 GPR85P60893 370 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 FXNQ16595 210 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 ST8SIA1Q92185 356 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 MALSU1Q96EH3 234 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 NKX3-1Q99801 234 aaPredicted RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 TAF9BQ9HBM6 251 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 TMEM100Q9NV29 134 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 R4GMQ9 66 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CNOT1A5YKK6 2376 aaKnown RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 A0A1W2PPV4 95 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 HSPB2A8KAH6 182 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CBR1P16152 277 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 LAP3P28838 519 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CD80P33681 288 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 HSPB2Q16082 182 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 AVPI1Q5T686 147 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CPEB2Q7Z5Q1 589 aaKnown RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 KIAA0907Q7Z7F0 614 aaPredicted RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 BATF2Q8N1L9 274 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 COX14Q96I36 57 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 CALHM2Q9HA72 323 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 MRPS2Q9Y399 296 aaKnown RBP10.39□□□□□ -0.75
RD3-201ENST00000367002 ZNF318Q5VUA4 2279 aa10.39□□□□□ -0.75
RD3-201ENST00000367002 LGALS8O00214 317 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 VAMP5O95183 116 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 MSR1P21757 451 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 CCR5P51681 352 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 SRPXP78539 464 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 MSMO1Q15800 293 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 TAF9Q16594 264 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 ST3GAL2Q16842 350 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 SHEQ5VZ18 495 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 SEMA6DQ8NFY4 1073 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 BARHL1Q9BZE3 327 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 ADGRL4Q9HBW9 690 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 POLR2AP24928 1970 aaKnown RBP10.38□□□□□ -0.75
RD3-201ENST00000367002 NTN1O95631 604 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 GNB3P16520 340 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 ZNF266Q14584 549 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 THEM4Q5T1C6 240 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 BAP18Q8IXM2 172 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 MORN4Q8NDC4 146 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 BHLHE23Q8NDY6 225 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 OTOSQ8NHW6 89 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 MAP6Q96JE9 813 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 BCO1Q9HAY6 547 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 SMCO4Q9NRQ5 59 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 GPR173Q9NS66 373 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 EXOGQ9Y2C4 368 aaKnown RBP10.38□□□□□ -0.75
RD3-201ENST00000367002 IRF2P14316 349 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 ZFP36L2P47974 494 aaKnown RBP10.38□□□□□ -0.75
RD3-201ENST00000367002 ZNF133P52736 654 aaPredicted RBP10.38□□□□□ -0.75
RD3-201ENST00000367002 PDZK1IP1Q13113 114 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 BAMBIQ13145 260 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 DUSP18Q8NEJ0 188 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 OR51A4Q8NGJ6 313 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 EXOSC3Q9NQT5 275 aaKnown RBP10.38□□□□□ -0.75
RD3-201ENST00000367002 COL24A1Q17RW2 1714 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 A0A1B0GTH9 108 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 M0R135 149 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 SERPINA7P05543 415 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 ADRB1P08588 477 aa10.38□□□□□ -0.75
RD3-201ENST00000367002 RPA2P15927 270 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms