RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 LOC107986453A0A1B0GWG9 222 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 ANKUB1A6NFN9 424 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 IMPA2O14732 288 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 UPK1BO75841 260 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 FUCA1P04066 466 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 HPNP05981 417 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 FBP1P09467 338 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 PSMB1P20618 241 aaKnown RBP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 HTR2BP41595 481 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 TIGITQ495A1 244 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 PINX1Q96BK5 328 aaKnown RBP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 CIB3Q96Q77 187 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 SIAEQ9HAT2 523 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 SCPEP1Q9HB40 452 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 CD300AQ9UGN4 299 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 NTNG1Q9Y2I2 539 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 PUS1Q9Y606 427 aaKnown RBP eCLIP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 ARFGEF2Q9Y6D5 1785 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 PRRC2BQ5JSZ5 2229 aaKnown RBP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 C7orf72A4D263 438 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 WDR1O75083 606 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 SNAPINO95295 136 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 RAF1P04049 648 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 RFX2P48378 723 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF385BQ569K4 471 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 B3GNT8Q7Z7M8 397 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 PTOV1Q86YD1 416 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 SLC25A21Q9BQT8 299 aaPredicted RBP9.96□□□□□ -0.82
CLIP1-203ENST00000361654 HRH4Q9H3N8 390 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 TAS2R5Q9NYW4 299 aa9.96□□□□□ -0.82
CLIP1-203ENST00000361654 MYH1P12882 1939 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 MYH4Q9Y623 1939 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TEX51A0A1B0GUA7 166 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 HSPB2A8KAH6 182 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SULT1C4O75897 302 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 PMP2P02689 132 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 RGPD1P0DJD0 1748 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF83P51522 516 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 NDUFA6P56556 154 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 HSPB2Q16082 182 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 CLPPQ16740 277 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TMEM41BQ5BJD5 291 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SSX9Q7RTT3 188 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 CNTRLQ7Z7A1 2325 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 Q8IYB0 196 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TMEM217Q8N7C4 229 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SUCNR1Q9BXA5 334 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 S1PR5Q9H228 398 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 OR52A5Q9H2C5 316 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TXNIPQ9H3M7 391 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 CTSFQ9UBX1 484 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 GPR37O15354 613 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TAPBPO15533 448 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SELENOFO60613 162 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ALDOCP09972 364 aaKnown RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 POU3F3P20264 500 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 PIGAP37287 484 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 CLINT1Q14677 625 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ACER2Q5QJU3 275 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SFXN4Q6P4A7 337 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 C1QTNF3Q9BXJ4 246 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 PECRQ9BY49 303 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 NARFLQ9H6Q4 476 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 BAZ2AQ9UIF9 1905 aaKnown RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF816-ZNF321PA0A0X1KG74 233 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 A6NIN4 97 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 CYTIPO60759 359 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 NCR1O76036 304 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TMIGD3P0DMS9 266 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TGM1P22735 817 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 GDNFP39905 211 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF85Q03923 595 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ELFN2Q5R3F8 820 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 PLPP7Q8NBV4 271 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 TMEM208Q9BTX3 173 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 EMCNQ9ULC0 261 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 NUP188Q5SRE5 1749 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 IGHV3-64DA0A0J9YX35 117 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ZFP92A6NM28 416 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 IL9P15248 144 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 B4GALT1P15291 398 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 NKX2-1P43699 371 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 HMGN3Q15651 99 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 PCK2Q16822 640 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 CEACAM16Q2WEN9 425 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 LINC01465Q8N7H1 131 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SLC38A9Q8NBW4 561 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 OR4D9Q8NGE8 314 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 LINC00615Q96LM1 132 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF436Q9C0F3 470 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SLC23A1Q9UHI7 598 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 RNF150Q9ULK6 438 aa9.95□□□□□ -0.82
CLIP1-203ENST00000361654 SBK2P0C263 348 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 TRIM23P36406 574 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 SORDQ00796 357 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 SAXO2Q658L1 398 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF331Q9NQX6 463 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-203ENST00000361654 DOT1LQ8TEK3 1739 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ZNF785A8K8V0 405 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 SNRNP70P08621 437 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms