RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TBCCD1Q9NVR7 557 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 POU2F3Q9UKI9 436 aa11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 EXOGQ9Y2C4 368 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-201ENST00000361439 DCHS2Q6V1P9 2916 aa11.96□□□□□ -0.5
NSMCE1-201ENST00000361439 ZNF670-ZNF695F2Z2N8 137 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 ATP6V1G2-DDX39BF2Z307 99 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 H3BSA7 217 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 J3QRE1 110 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 ZNF254O75437 659 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 FADS2O95864 444 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 DBTP11182 482 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 MYF6P23409 242 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 DCTDP32321 178 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 GLRXP35754 106 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 OPRL1P41146 370 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 NAA10P41227 235 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 UCP2P55851 309 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 TPTEP56180 551 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 CXCR4P61073 352 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 ROM1Q03395 351 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 EGR3Q06889 387 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 CDK5R2Q13319 367 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 OTPQ5XKR4 325 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 C20orf204Q6ZNR8 217 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 SLC35F2Q8IXU6 374 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 ZNF611Q8N823 705 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 KBTBD8Q8NFY9 601 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 OR10S1Q8NGN2 331 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 LILRB1Q8NHL6 650 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 THEM6Q8WUY1 208 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 AKAP1Q92667 903 aaKnown RBP eCLIP11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 RNFT2Q96EX2 444 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 C4orf45Q96LM5 186 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 KCNJ15Q99712 375 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 DHRS9Q9BPW9 319 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 COPS4Q9BT78 406 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 MROQ9BYG7 248 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 INPP5EQ9NRR6 644 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 CA10Q9NS85 328 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 PLCXD1Q9NUJ7 323 aa11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 CISD1Q9NZ45 108 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-201ENST00000361439 MRPL3P09001 348 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 PSKH1P11801 424 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 HGFACQ04756 655 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 ZNF91Q05481 1191 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 SPOCK1Q08629 439 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 TAF13Q15543 124 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 RSPO1Q2MKA7 263 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 HIST2H2BCQ6DN03 193 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 TMEM154Q6P9G4 183 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 DRAM2Q6UX65 266 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 COLCA1Q6ZS62 124 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 KCTD20Q7Z5Y7 419 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 ZNF679Q8IYX0 411 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 OR5L1Q8NGL2 311 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 APOBEC3DQ96AK3 386 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 MRPL48Q96GC5 212 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 JAM3Q9BX67 310 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 C1QTNF5Q9BXJ0 243 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 CENPMQ9NSP4 180 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 ATP23Q9Y6H3 246 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 PLCE1Q9P212 2302 aa11.94□□□□□ -0.5
NSMCE1-201ENST00000361439 HEATR1Q9H583 2144 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 NBPF19A0A087WUL8 3843 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ROS1P08922 2347 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 A0A1W2PPR1 153 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ACOD1A6NK06 481 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 E7EQL1 145 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 M0R135 149 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 SMPD2O60906 423 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 SULT1C4O75897 302 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ABHD16AO95870 558 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 PLAUP00749 431 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 H2BFMP0C1H6 154 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ACSM4P0C7M7 580 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 PIPP12273 146 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 CCL2P13500 99 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 PRF1P14222 555 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 CCNOP22674 350 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 DCKP27707 260 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 HSD11B1P28845 292 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 WNT5AP41221 380 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 EVX1P49640 407 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 SNTB2Q13425 540 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 KRT80Q6KB66 452 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ZNF322Q6U7Q0 402 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 PAQR4Q8N4S7 273 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ACBD7Q8N6N7 88 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 CNIH3Q8TBE1 160 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 TMEM171Q8WVE6 324 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 LGALS12Q96DT0 336 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ZNF799Q96GE5 643 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 CNOT2Q9NZN8 540 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 GRIP1Q9Y3R0 1128 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 CMAHPQ9Y471 501 aa11.93□□□□□ -0.5
NSMCE1-201ENST00000361439 ABCA12Q86UK0 2595 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms