RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PIN1P1O15428 100 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 PMS2P2O95744 297 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 CDKN2AP42771 156 aaKnown RBP11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 DAP3P51398 398 aaKnown RBP11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 AP2S1P53680 142 aaPredicted RBP11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 B3GALT5-AS1P59052 145 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 CSNK2A1P68400 391 aaPredicted RBP11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 ACKR1Q16570 336 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 SMUG1Q53HV7 270 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 TMEM225Q6GV28 225 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 GALNTL5Q7Z4T8 443 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 BEST4Q8NFU0 473 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 NPIPA1Q9UND3 350 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 ETV7Q9Y603 341 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 SPENQ96T58 3664 aaKnown RBP11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 DNAJC13O75165 2243 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 PRRC2CQ9Y520 2896 aaKnown RBP11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 ATMQ13315 3056 aa11.71□□□□□ -0.53
SQSTM1-201ENST00000360718 A0A1B0GUH1 482 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 ACOD1A6NK06 481 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 LINC01387J3KSC0 135 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 ICMTO60725 284 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF432O94892 652 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 IGHMP01871 453 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 ART1P52961 327 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 Q499Y3 187 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 MESTQ5EB52 335 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF766Q5HY98 468 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 LRRN1Q6UXK5 716 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 OR52I2Q8NH67 350 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 SNIP1Q8TAD8 396 aaKnown RBP11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNRF4Q8WWF5 429 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 NSMAFQ92636 917 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 KLHL15Q96M94 604 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 MNTQ99583 582 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 DHRS9Q9BPW9 319 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 LIN7BQ9HAP6 207 aa11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 GPN1Q9HCN4 374 aaPredicted RBP11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 URB1O60287 2271 aaKnown RBP11.71□□□□□ -0.54
SQSTM1-201ENST00000360718 A6NIZ1 184 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 SHOXO15266 292 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ZFPL1O95159 310 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 KLK2P20151 261 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 MNDAP41218 407 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 MEOX1P50221 254 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF81P51508 661 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 RAB14P61106 215 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 RAP1BP61224 184 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 RAP1AP62834 184 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 POU3F1Q03052 451 aaPredicted RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 LGALSLQ3ZCW2 172 aaPredicted RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 WIPI1Q5MNZ9 446 aaPredicted RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 TMEM69Q5SWH9 247 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF684Q5T5D7 378 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 MTFR2Q6P444 385 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 KDM8Q8N371 416 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 OR2T4Q8NH00 348 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 OR5AK2Q8NH90 309 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 SYNPRQ8TBG9 265 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ZPLD1Q8TCW7 415 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 NAA11Q9BSU3 229 aaPredicted RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 TTTY12Q9BZ98 90 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 SLC25A18Q9H1K4 315 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF703Q9H7S9 590 aaPredicted RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 UBQLN2Q9UHD9 624 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 SSUH2Q9Y2M2 353 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ZNF407Q9C0G0 2248 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 A0A1W2PNV4 684 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 NPIPB13A6NJU9 1138 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 NPIPB4C9JG80 1138 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ACOT7O00154 380 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 CELA3AP09093 270 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 HSF1Q00613 529 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ALKBH1Q13686 389 aaKnown RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 LINC01590Q5TEZ4 76 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 HDDC2Q7Z4H3 204 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 UEVLDQ8IX04 471 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 OR2T35Q8NGX2 323 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 HAVCR1Q96D42 359 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 SLC25A38Q96DW6 304 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 GFI1Q99684 422 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 DPCDQ9BVM2 203 aaPredicted RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 CCDC86Q9H6F5 360 aaKnown RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 HEXA-AS1Q9H8Q6 139 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 FANCFQ9NPI8 374 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 MRPL15Q9P015 296 aaKnown RBP11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 FBXL3Q9UKT7 428 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 FOXJ3Q9UPW0 622 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 AUP1Q9Y679 476 aa11.7□□□□□ -0.54
SQSTM1-201ENST00000360718 ANKRD20A5PA0PJZ0 165 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 H0YC42 278 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 GMDSO60547 372 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 HPXP02790 462 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 HPNP05981 417 aa11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 POU3F2P20265 443 aaPredicted RBP11.69□□□□□ -0.54
SQSTM1-201ENST00000360718 TNFSF10P50591 281 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms