RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TRAPPC2BP0DI82 140 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 UBE2IP63279 158 aaKnown RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 PTRH1Q86Y79 214 aaKnown RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 MRPS24Q96EL2 167 aaKnown RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 PDCD1LG2Q9BQ51 273 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 COL16A1Q07092 1604 aaPredicted RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 MEIS3P2A8K0S8 358 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 SUMO3P55854 103 aaPredicted RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 OR1D5P58170 312 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 RAB1AP62820 205 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 SAXO2Q658L1 398 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 LILRA2Q8N149 483 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 ZNF740Q8NDX6 193 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 TAAR6Q96RI8 345 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 SLC25A32Q9H2D1 315 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 SEBOXQ9HB31 216 aaPredicted RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 SLC2A8Q9NY64 477 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 LOC107986453A0A1B0GWG9 222 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 SLC22A20A6NK97 555 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 LALBAP00709 142 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 COX5AP20674 150 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 AGBL4Q5VU57 503 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 MFSD12Q6NUT3 480 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 MEX3DQ86XN8 651 aaKnown RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 SELENBP1Q13228 472 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 EIF3IQ13347 325 aaKnown RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 POU4F3Q15319 338 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 ADPRMQ3LIE5 342 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 AKR1E2Q96JD6 320 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 RANGRFQ9HD47 186 aaPredicted RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 OSGIN1Q9UJX0 560 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 SHISA7A6NL88 538 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 AKR1C3P42330 323 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 ZNF789Q5FWF6 425 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 C9orf152Q5JTZ5 239 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 OTUD1Q5VV17 481 aaPredicted RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 EXD3Q8N9H8 876 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 OR5B3Q8NH48 314 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 KISS1RQ969F8 398 aaPredicted RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 PIGTQ969N2 578 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 GALMQ96C23 342 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 R4GMQ9 66 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 FUT6P51993 359 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 RAB6CQ53S08 254 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 REEP6Q96HR9 211 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 C3orf30Q96M34 536 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 LRRC3CA6NJW4 275 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 SNRPBP14678 240 aaKnown RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 GNB1P62873 340 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 PXT1Q8NFP0 134 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 FOXN4Q96NZ1 517 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 C19orf43Q9BQ61 176 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 FLVCR1Q9Y5Y0 555 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 P2RY10O00398 339 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 TERTO14746 1132 aaKnown RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 AMTP48728 403 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 HTR4Q13639 388 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 MARCH8Q5T0T0 291 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 LAIR1Q6GTX8 287 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 OR51H1Q8NH63 302 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 RHOXF1Q8NHV9 184 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 IFI44Q8TCB0 444 aa8.85□□□□□ -0.99
CUX1-203ENST00000360264 C19orf53Q9UNZ5 99 aaPredicted RBP8.85□□□□□ -0.99
CUX1-203ENST00000360264 ENDOGQ14249 297 aaKnown RBP8.84□□□□□ -0.99
CUX1-203ENST00000360264 NKAIN1Q4KMZ8 207 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 DHRS4L2Q6PKH6 230 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 FRG2CA6NGY1 282 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 ACOT8O14734 319 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 LINC00346Q8IVM7 164 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 GABRG1Q8N1C3 465 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 ARRDC2Q8TBH0 407 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 GPX8Q8TED1 209 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 ARSGQ96EG1 525 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 TMEM265A0A087WTH1 108 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 STMND1H3BQB6 276 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 GCSHP23434 173 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 SUMO1P63165 101 aaKnown RBP8.84□□□□□ -0.99
CUX1-203ENST00000360264 RELAQ04206 551 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 IAH1Q2TAA2 248 aaPredicted RBP8.84□□□□□ -0.99
CUX1-203ENST00000360264 SIRT6Q8N6T7 355 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 SLC37A2Q8TED4 501 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 CCDC74AQ96AQ1 378 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 PXNP49023 591 aaPredicted RBP8.84□□□□□ -0.99
CUX1-203ENST00000360264 ZNF586Q9NXT0 402 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 GPX2P18283 190 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 LYSMD2Q8IV50 215 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 OR1N1Q8NGS0 311 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 NSG2Q9Y328 171 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 ADAM11O75078 769 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 CNMDO75829 334 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 ERV3-1Q14264 604 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 ETFRF1Q6IPR1 90 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 TDHQ8IZJ6 230 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 OR52I1Q8NGK6 324 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 MN1Q10571 1320 aaPredicted RBP8.84□□□□□ -0.99
CUX1-203ENST00000360264 M0QYG6 137 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 YIF1AO95070 293 aa8.84□□□□□ -0.99
CUX1-203ENST00000360264 PDGFBP01127 241 aaPredicted RBP8.84□□□□□ -0.99
CUX1-203ENST00000360264 SPI1P17947 270 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms