RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PATE1Q8WXA2 126 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 SEH1LQ96EE3 360 aa16.75■□□□□ 0.27
SHANK1-202ENST00000359082 MRPS24Q96EL2 167 aaKnown RBP16.75■□□□□ 0.27
SHANK1-202ENST00000359082 NKAIN1Q4KMZ8 207 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 RDH5Q92781 318 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 MEIKINA0A087WXM9 373 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 UMAD1C9J7I0 102 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 HRO43593 1189 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SLC25A6P12236 298 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SPI1P17947 270 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SDHAP31040 664 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 UBE2MP61081 183 aaKnown RBP16.74■□□□□ 0.27
SHANK1-202ENST00000359082 PYCR3Q53H96 274 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 FUNDC1Q8IVP5 155 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 LFNGQ8NES3 379 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 FOXQ1Q9C009 403 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SPACA1Q9HBV2 294 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 A0A1W2PR48 441 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 ST8SIA3O43173 380 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 DDOSTP39656 456 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 OR10A3P58181 314 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 H3F3CQ6NXT2 135 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 PAQR6Q6TCH4 344 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SDF2Q99470 211 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 LINC01553A4QN01 128 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 LALBAP00709 142 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 ADRA2CP18825 462 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 EMDP50402 254 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 EXOSC2Q13868 293 aaKnown RBP16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SLC38A9Q8NBW4 561 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 SIAEQ9HAT2 523 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 C5P01031 1676 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 ZNF26P17031 533 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-202ENST00000359082 DUSP6Q16828 381 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 FGF22Q9HCT0 170 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 RYDENQ9NUL5 291 aaKnown RBP16.74■□□□□ 0.27
SHANK1-202ENST00000359082 DAPP1Q9UN19 280 aa16.74■□□□□ 0.27
SHANK1-202ENST00000359082 PRRG2O14669 202 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 NRASP01111 189 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 FCRL6Q6DN72 434 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 ELSPBP1Q96BH3 223 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 BTG2P78543 158 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 THEM4Q5T1C6 240 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 NLRC3Q7RTR2 1065 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 KPTNQ9Y664 436 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 NUP98P52948 1817 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 PPP5D1E7EU14 171 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 SBK2P0C263 348 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 FCGR2CP31995 323 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 SNRPNP63162 240 aaKnown RBP16.73■□□□□ 0.27
SHANK1-202ENST00000359082 ZNF385BQ569K4 471 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 ADGRG3Q86Y34 549 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 GABRG1Q8N1C3 465 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 ACER3Q9NUN7 267 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 A0A0B4J203 849 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 SEMG1P04279 462 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 ZDHHC11BP0C7U3 371 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 ADAM5Q6NVV9 412 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 CDH26Q8IXH8 852 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 FYTTD1Q96QD9 318 aaKnown RBP16.73■□□□□ 0.27
SHANK1-202ENST00000359082 FGF17O60258 216 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 WDR1O75083 606 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 GPX2P18283 190 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 DEFB109BQ30KR1 87 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 DHRS4L2Q6PKH6 230 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 CHST6Q9GZX3 395 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 POLDIP2Q9Y2S7 368 aa16.73■□□□□ 0.27
SHANK1-202ENST00000359082 OR2J3O76001 311 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 CTXN2P0C2S0 81 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 RFC3P40938 356 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 OR5I1Q13606 314 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 ZNF77Q15935 545 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 MFSD4AQ8N468 514 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 SLC24A4Q8NFF2 622 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 PDZK1IP1Q13113 114 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 TMEM268Q5VZI3 342 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 TSEN54Q7Z6J9 526 aaKnown RBP16.72■□□□□ 0.27
SHANK1-202ENST00000359082 GPR84Q9NQS5 396 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 A3GALT2U3KPV4 340 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 CITO14578 2027 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 IRS1P35568 1242 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 BAMBIQ13145 260 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 MYBPHQ13203 477 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 CTU2Q2VPK5 515 aaKnown RBP16.72■□□□□ 0.27
SHANK1-202ENST00000359082 TIGD3Q6B0B8 471 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 CA13Q8N1Q1 262 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 CORO2AQ92828 525 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 C19orf53Q9UNZ5 99 aaPredicted RBP16.72■□□□□ 0.27
SHANK1-202ENST00000359082 A0A087WV62 115 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 FUCA1P04066 466 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 OLIG1Q8TAK6 271 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 ABLIM3O94929 683 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 DLEU7Q6UYE1 221 aa16.72■□□□□ 0.27
SHANK1-202ENST00000359082 CYTIPO60759 359 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 GIPP09681 153 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-202ENST00000359082 ACSM5Q6NUN0 579 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 ST8SIA2Q92186 375 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 ACTR3CQ9C0K3 210 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-202ENST00000359082 LAT2Q9GZY6 243 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms