RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TMEM81Q6P7N7 255 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 C17orf107Q6ZR85 190 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ACOT7LQ6ZUV0 252 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 YRDCQ86U90 279 aaKnown RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 SLC7A5P1Q8MH63 180 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CA13Q8N1Q1 262 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 FAM26EQ8N5C1 309 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SLC24A4Q8NFF2 622 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ZDHHC16Q969W1 377 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ASB16Q96NS5 453 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 OR5M11Q96RB7 305 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SDF2Q99470 211 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 DDOQ99489 341 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 DEFB127Q9H1M4 99 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ACOXLQ9NUZ1 547 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 HDGFL3Q9Y3E1 203 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 COL16A1Q07092 1604 aaPredicted RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 MEIKINA0A087WXM9 373 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SERTM2A0A1B0GWG4 89 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 C7orf72A4D263 438 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 C5orf49A4QMS7 147 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ANKRD61A6NGH8 418 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ZBTB42B2RXF5 422 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 IDSB3KWA1 339 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 I6L893 689 aaPredicted RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 ASAH1Q13510 395 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 LRRC26Q2I0M4 334 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ABI3BPQ7Z7G0 1075 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 TDHQ8IZJ6 230 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SLC38A6Q8IZM9 456 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SLC39A7Q92504 469 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SMIM14Q96QK8 99 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 MED18Q9BUE0 208 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 PCED1AQ9H1Q7 454 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ZNF586Q9NXT0 402 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CGGBP1Q9UFW8 167 aaPredicted RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 PPP1R3CQ9UQK1 317 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CSAG2Q9Y5P2 127 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SLC22A20A6NK97 555 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 HMGN4O00479 90 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ZNF195O14628 629 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 OR5G3P0C626 314 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 ZDHHC11BP0C7U3 371 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 OR13C7P0DN81 318 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 IRS1P35568 1242 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 AKR1C3P42330 323 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 GPR3P46089 330 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CDK5Q00535 292 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 SYT14P1Q58G82 188 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 Q8IYB0 196 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 OLIG1Q8TAK6 271 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 RPL3LQ92901 407 aaKnown RBP5.89□□□□□ -1.47
UPF2-201ENST00000356352 PELI1Q96FA3 418 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CCDC74BQ96LY2 380 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 TXNIPQ9H3M7 391 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 CRLF2Q9HC73 371 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 NTNG1Q9Y2I2 539 aa5.89□□□□□ -1.47
UPF2-201ENST00000356352 BAZ2AQ9UIF9 1905 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 RAB27BO00194 218 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 COX7A2P2O60397 106 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR2C1O95371 312 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 F10P00742 488 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 PDGFBP01127 241 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 SPP1P10451 314 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ALOX5APP20292 161 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 AGFG1P52594 562 aaKnown RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 KIAA0141Q14154 515 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 LIPNQ5VXI9 398 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 RGS7BPQ6MZT1 257 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 TRAT1Q6PIZ9 186 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 WFDC8Q8IUA0 241 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 BHLHE23Q8NDY6 225 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR4F5Q8NH21 305 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TTC9Q92623 222 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TMEM230Q96A57 120 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 OR4F4Q96R69 305 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SUCNR1Q9BXA5 334 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 NKX6-2Q9C056 277 aaPredicted RBP5.88□□□□□ -1.47
UPF2-201ENST00000356352 BANF2Q9H503 90 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 IKZF5Q9H5V7 419 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 HES4Q9HCC6 221 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TMEM9BQ9NQ34 198 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ANKRD10Q9NXR5 420 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 CTSFQ9UBX1 484 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SLC5A6Q9Y289 635 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 C4BP0C0L5 1744 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 PRSS37A4D1T9 235 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TUBAL3A6NHL2 446 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 LRRC3CA6NJW4 275 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 GFYI3L273 518 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SRFP11831 508 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 TNFRSF1AP19438 455 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 RAB5AP20339 215 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 H3F3AP84243 136 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ACKR1Q16570 336 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 VMA21Q3ZAQ7 101 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 LRRC10Q5BKY1 277 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 LYSMD2Q8IV50 215 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 ARHGEF39Q8N4T4 335 aa5.88□□□□□ -1.47
UPF2-201ENST00000356352 SIGLECL1Q8N7X8 197 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms