RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 OR7C2O60412 319 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 IAPPP10997 89 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 TMEM268Q5VZI3 342 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 ADAMTS5Q9UNA0 930 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 DHODHQ02127 395 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 ELAVL1Q15717 326 aaKnown RBP13.58□□□□□ -0.24
LMX1B-201ENST00000355497 PXDC1Q5TGL8 231 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 C19orf35Q6ZS72 473 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 C11orf42Q8N5U0 333 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 OR4C5Q8NGB2 326 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 DYNC2LI1Q8TCX1 351 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 LHX4Q969G2 390 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 PINX1Q96BK5 328 aaKnown RBP13.58□□□□□ -0.24
LMX1B-201ENST00000355497 TAAR6Q96RI8 345 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 SH2D7A6NKC9 451 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-201ENST00000355497 RFPL4AA6NLU0 287 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 RFPL4AL1F8VTS6 287 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 PLPP1O14494 284 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 SCO1O75880 301 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 COX5AP20674 150 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 GLRA1P23415 457 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 CD1CP29017 333 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 SDHAP31040 664 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 AKR1C3P42330 323 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 AMTP48728 403 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 FABP9Q0Z7S8 132 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF574Q6ZN55 896 aaPredicted RBP13.58□□□□□ -0.24
LMX1B-201ENST00000355497 CADM3Q8N126 398 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 BCORP1Q8N888 145 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 TMEM18Q96B42 140 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 NRSN2Q9GZP1 204 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 PSENENQ9NZ42 101 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 SLC23A1Q9UHI7 598 aa13.58□□□□□ -0.24
LMX1B-201ENST00000355497 OLIG1Q8TAK6 271 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 EMC6Q9BV81 110 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 THAP10Q9P2Z0 257 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 CCL26Q9Y258 94 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 TIMM9Q9Y5J7 89 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 TCHHQ07283 1943 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 IGHV3-20A0A0C4DH32 117 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF207O43670 478 aaKnown RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 SNRPNP63162 240 aaKnown RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 THEM4Q5T1C6 240 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 LAIR1Q6GTX8 287 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF485Q8NCK3 441 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 MRPS24Q96EL2 167 aaKnown RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 GABARAPL1Q9H0R8 117 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 ATP23Q9Y6H3 246 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 VAMP5O95183 116 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 CD1EP15812 388 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 RACK1P63244 317 aaKnown RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 BAMBIQ13145 260 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 FBXW5Q969U6 566 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 S1PR3Q99500 378 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 MYH2Q9UKX2 1941 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 OR2M5A3KFT3 312 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 PCSK6P29122 969 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 TRNP1Q6NT89 227 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 DRAM2Q6UX65 266 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 C6orf15Q6UXA7 325 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 LRRTM1Q86UE6 522 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 GPX8Q8TED1 209 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 UBE2FQ969M7 185 aa13.57□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF346Q9UL40 294 aaKnown RBP13.57□□□□□ -0.24
LMX1B-201ENST00000355497 SPP1P10451 314 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 HIST1H1CP16403 213 aaKnown RBP13.56□□□□□ -0.24
LMX1B-201ENST00000355497 RPS16P62249 146 aaKnown RBP13.56□□□□□ -0.24
LMX1B-201ENST00000355497 HSF5Q4G112 596 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-201ENST00000355497 ALKAL1Q6UXT8 129 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF573Q86YE8 665 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 FYTTD1Q96QD9 318 aaKnown RBP13.56□□□□□ -0.24
LMX1B-201ENST00000355497 SMIM7Q9BQ49 75 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 CABLES2Q9BTV7 478 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 TINAGL1Q9GZM7 467 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-201ENST00000355497 IKZF5Q9H5V7 419 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF354AO60765 605 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-201ENST00000355497 WDR1O75083 606 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 OR2B8PP59922 312 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 EGR3Q06889 387 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 LINC00299Q6ZSB3 139 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 OR13H1Q8NG92 308 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 JAM3Q9BX67 310 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 RNF167Q9H6Y7 350 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 RAB18Q9NP72 206 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 ZNF835Q9Y2P0 537 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 MEIKINA0A087WXM9 373 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 HMGN4O00479 90 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 TO15178 435 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 LRP3O75074 770 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 VEGFBP49765 207 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 RANP62826 216 aaKnown RBP13.56□□□□□ -0.24
LMX1B-201ENST00000355497 PAQR9Q6ZVX9 377 aa13.56□□□□□ -0.24
LMX1B-201ENST00000355497 YRDCQ86U90 279 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms