RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 RNF133Q8WVZ7 376 aa19.12■□□□□ 0.65
SHMT1-203ENST00000354098 TBX5Q99593 518 aa19.12■□□□□ 0.65
SHMT1-203ENST00000354098 ATPIF1Q9UII2 106 aa19.12■□□□□ 0.65
SHMT1-203ENST00000354098 GRIP1Q9Y3R0 1128 aa19.12■□□□□ 0.65
SHMT1-203ENST00000354098 TACC2O95359 2948 aa19.12■□□□□ 0.65
SHMT1-203ENST00000354098 SNTNA6NMZ2 147 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 PRR32B1ATL7 298 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 F5H5K5 113 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 HS3ST1O14792 307 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 GPRIN2O60269 458 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 NGFP01138 241 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 DBTP11182 482 aaKnown RBP19.11■□□□□ 0.65
SHMT1-203ENST00000354098 UCP2P55851 309 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 POU4F2Q12837 409 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 THAP5Q7Z6K1 395 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 NAA40Q86UY6 237 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 NUP37Q8NFH4 326 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 FBLIM1Q8WUP2 373 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 C4orf45Q96LM5 186 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 COPS4Q9BT78 406 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 CA10Q9NS85 328 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 ZNF878C9JN71 531 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 PSMD9O00233 223 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 THBS4P35443 961 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 HSPA13P48723 471 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 CXCR4P61073 352 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 ERVS71-1P61550 626 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 ECH1Q13011 328 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 FBXW5Q969U6 566 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 LGALS12Q96DT0 336 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 ABCA12Q86UK0 2595 aa19.11■□□□□ 0.65
SHMT1-203ENST00000354098 PCSK6P29122 969 aa19.1■□□□□ 0.65
SHMT1-203ENST00000354098 OPRL1P41146 370 aa19.1■□□□□ 0.65
SHMT1-203ENST00000354098 TAF13Q15543 124 aa19.1■□□□□ 0.65
SHMT1-203ENST00000354098 MSMPQ1L6U9 139 aa19.1■□□□□ 0.65
SHMT1-203ENST00000354098 LRRN1Q6UXK5 716 aa19.1■□□□□ 0.65
SHMT1-203ENST00000354098 OR10H4Q8NGA5 316 aa19.1■□□□□ 0.65
SHMT1-203ENST00000354098 EIF3KQ9UBQ5 218 aaKnown RBP19.1■□□□□ 0.65
SHMT1-203ENST00000354098 SPEF1Q9Y4P9 236 aa19.1■□□□□ 0.65
SHMT1-203ENST00000354098 APCP25054 2843 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 A0A1W2PQL4 384 aaPredicted RBP19.09■□□□□ 0.65
SHMT1-203ENST00000354098 J3QRE1 110 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 MAGEB4O15481 346 aaPredicted RBP19.09■□□□□ 0.65
SHMT1-203ENST00000354098 SMPD2O60906 423 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 ABHD16AO95870 558 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 ACSM4P0C7M7 580 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 PRKXP51817 358 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 RFPL4BQ6ZWI9 263 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 SSX6Q7RTT6 188 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 ABHD4Q8TB40 342 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 TMEM171Q8WVE6 324 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 ZNF184Q99676 751 aaPredicted RBP19.09■□□□□ 0.65
SHMT1-203ENST00000354098 ANKRD60Q9BZ19 345 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 SLCO1C1Q9NYB5 712 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 EXOGQ9Y2C4 368 aaKnown RBP19.09■□□□□ 0.65
SHMT1-203ENST00000354098 RPL36Q9Y3U8 105 aaKnown RBP19.09■□□□□ 0.65
SHMT1-203ENST00000354098 TMEM14AQ9Y6G1 99 aa19.09■□□□□ 0.65
SHMT1-203ENST00000354098 ICMTO60725 284 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 OR2T7P0C7T2 308 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 ANOS1P23352 680 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 OTX1P32242 354 aaPredicted RBP19.08■□□□□ 0.65
SHMT1-203ENST00000354098 RAD52P43351 418 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 ZNF611Q8N823 705 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 OR2T27Q8NH04 317 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 SPTSSAQ969W0 71 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 KCNJ15Q99712 375 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 DHRS9Q9BPW9 319 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 RHNO1Q9BSD3 238 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 MYRFQ9Y2G1 1151 aa19.08■□□□□ 0.65
SHMT1-203ENST00000354098 ZNF670-ZNF695F2Z2N8 137 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 M0R135 149 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 LCKP06239 509 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 H2BFMP0C1H6 154 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 MYF6P23409 242 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 GLRXP35754 106 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 SLC15A1P46059 708 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 FABP6P51161 128 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 ADIPOQQ15848 244 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 ZNF322Q6U7Q0 402 aaPredicted RBP19.08■□□□□ 0.64
SHMT1-203ENST00000354098 RHOUQ7L0Q8 258 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 OR1J1Q8NGS3 322 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 ZNF799Q96GE5 643 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 DCLRE1CQ96SD1 692 aaKnown RBP19.08■□□□□ 0.64
SHMT1-203ENST00000354098 MNTQ99583 582 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 RAB26Q9ULW5 256 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 FZR1Q9UM11 496 aa19.08■□□□□ 0.64
SHMT1-203ENST00000354098 RAI1Q7Z5J4 1906 aaPredicted RBP19.07■□□□□ 0.64
SHMT1-203ENST00000354098 CSMD2Q7Z408 3487 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 PLCE1Q9P212 2302 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 SOD3P08294 240 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 APOBEC3AP31941 199 aaPredicted RBP19.07■□□□□ 0.64
SHMT1-203ENST00000354098 TPTEP56180 551 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 GRB2P62993 217 aaKnown RBP19.07■□□□□ 0.64
SHMT1-203ENST00000354098 ZNF85Q03923 595 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 SPATA46Q5T0L3 261 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 ARL9Q6T311 187 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 KRT77Q7Z794 578 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.07■□□□□ 0.64
SHMT1-203ENST00000354098 ASB17Q8WXJ9 295 aa19.07■□□□□ 0.64
SHMT1-203ENST00000354098 OR8B4Q96RC9 309 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms