RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ARHGAP18Q8N392 663 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 INO80EQ8NBZ0 244 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SUN5Q8TC36 379 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 VN1R17PQ8TDU5 208 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MRPS31Q92665 395 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM54Q969K7 222 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MSANTD3Q96H12 275 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 FOXC2Q99958 501 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 FGFBP2Q9BYJ0 223 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TM6SF2Q9BZW4 377 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ELOVL4Q9GZR5 314 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 C20orf85Q9H1P6 137 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 FOLH1BQ9HBA9 442 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 AMBNQ9NP70 447 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 Q9UF83 564 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TMCO1Q9UM00 188 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 FLVCR2Q9UPI3 526 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MRPS18BQ9Y676 258 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MAPK8IP3Q9UPT6 1336 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF609O15014 1411 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 COL5A2P05997 1499 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 LY75O60449 1722 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 A0A1B0GUA9 196 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NME4O00746 187 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 UGT2B17O75795 530 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 UTS2O95399 124 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SNAI1O95863 264 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 GIG44P09565 113 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SYT1P21579 422 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 VHLP40337 213 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 RFC3P40938 356 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NCBP2P52298 156 aaKnown RBP eCLIP1.24□□□□□ -2.215e-10■■■■■ 33.9
BRCA1-202ENST00000354071 CRIP2P52943 208 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SP4Q02446 784 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 FZD2Q14332 565 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF630Q2M218 657 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 DCST2Q5T1A1 773 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 UTF1Q5T230 341 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF658Q5TYW1 1059 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PID1Q7Z2X4 250 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ZBED8Q8IZ13 594 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 MYOCDQ8IZQ8 938 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 FAM58AQ8N1B3 248 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 LIX1Q8N485 282 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NPRL2Q8WTW4 380 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ACOT11Q8WXI4 607 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ACBD6Q9BR61 282 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 ANKHQ9HCJ1 492 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 IMPAD1Q9NX62 359 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 NXT1Q9UKK6 140 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TSSC4Q9Y5U2 329 aaPredicted RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 PKHD1P08F94 4074 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 USP47Q96K76 1375 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 SCN4AP35499 1836 aa1.24□□□□□ -2.21
BRCA1-202ENST00000354071 TDRD15B5MCY1 1934 aaKnown RBP1.24□□□□□ -2.21
BRCA1-202ENST00000354071 CENPJQ9HC77 1338 aaPredicted RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 IGLV1-36A0A0B4J1U3 117 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 USP27XA6NNY8 438 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 C12orf77C9JDV5 145 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 DYNC1I1O14576 645 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 YKT6O15498 198 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 NUPL2O15504 423 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 MPDU1O75352 247 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 KBTBD11O94819 623 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 GJB5O95377 273 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TIMP1P01033 207 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 EIF4EP06730 217 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FUT3P21217 361 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SUB1P53999 127 aaKnown RBP eCLIP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 YWHAEP62258 255 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SELENOTP62341 195 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SKP1P63208 163 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 MXD1Q05195 221 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 EGFEM1PQ0D2K5 195 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 STX3Q13277 289 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM30BQ3MIR4 351 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 C2CD6Q53TS8 623 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 APOBEC3HQ6NTF7 200 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 EPGNQ6UW88 154 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 SLC25A42Q86VD7 318 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 KRTAP7-1Q8IUC3 87 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CEND1Q8N111 149 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 OR13C9Q8NGT0 318 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 GPR151Q8TDV0 419 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FBXO17Q96EF6 278 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 GABRG3Q99928 467 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ZDHHC4Q9NPG8 344 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM9BQ9NQ34 198 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 ADAM22Q9P0K1 906 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CIDEBQ9UHD4 219 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 NOSIPQ9Y314 301 aaKnown RBP1.23□□□□□ -2.21
BRCA1-202ENST00000354071 COL6A5A8TX70 2615 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 GOLGA3Q08378 1498 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 IGHV3OR16-13A0A075B7E8 117 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 TRPC5OSA6NMA1 111 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 FAM220BPB1ANY3 271 aa1.23□□□□□ -2.21
BRCA1-202ENST00000354071 CETN3O15182 167 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms