RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MSMO1Q15800 293 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 FOXB1Q99853 325 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 SULT4A1Q9BR01 284 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 GLTPQ9NZD2 209 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 SIGLEC7Q9Y286 467 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 OR6C6A6NF89 314 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 XRCC2O43543 280 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 LILRB5O75023 590 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 PDGFBP01127 241 aaPredicted RBP13.44□□□□□ -0.26
COL17A1-201ENST00000353479 ATF4P18848 351 aaPredicted RBP13.44□□□□□ -0.26
COL17A1-201ENST00000353479 TUBG1P23258 451 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 FABP6P51161 128 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 EMP3P54852 163 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 DOC2BQ14184 412 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 MRM1Q6IN84 353 aaKnown RBP13.44□□□□□ -0.26
COL17A1-201ENST00000353479 JMJD6Q6NYC1 403 aaPredicted RBP13.44□□□□□ -0.26
COL17A1-201ENST00000353479 TMPRSS11FQ6ZWK6 438 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.44□□□□□ -0.26
COL17A1-201ENST00000353479 OR56B2PQ8NGI1 322 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 OR51A2Q8NGJ7 313 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 SMIM19Q96E16 107 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 STEAP3Q658P3 488 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 PDZD9Q8IXQ8 264 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 TMEM185AQ8NFB2 350 aa13.44□□□□□ -0.26
COL17A1-201ENST00000353479 hCG_1809904A0A1W2PP81 198 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 A0A1W2PPE2 198 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 A0A1W2PR64 198 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 A0A1W2PRV1 198 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 PCSK6P29122 969 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 ZNF121P58317 390 aaPredicted RBP13.43□□□□□ -0.26
COL17A1-201ENST00000353479 CDK5R1Q15078 307 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 MDGA2Q7Z553 956 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 FAM210AQ96ND0 272 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 GPR87Q9BY21 358 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 TOR1AO14656 332 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 IMPA2O14732 288 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 SPINT2O43291 252 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 ZNF169Q14929 603 aaPredicted RBP13.43□□□□□ -0.26
COL17A1-201ENST00000353479 OR2A2Q6IF42 318 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 GCNT2Q8N0V5 402 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 DEFB108BQ8NET1 73 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 OR4D6Q8NGJ1 314 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 HPP00738 406 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 CHRM2P08172 466 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 ZNF321PQ8N8H1 164 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 IL20Q9NYY1 176 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 HRKO00198 91 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 RAD52P43351 418 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 PLPP5Q8NEB5 264 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 OR2M2Q96R28 347 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 PSD2Q9BQI7 771 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 RGCCQ9H4X1 137 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 HRASLSQ9HDD0 168 aa13.43□□□□□ -0.26
COL17A1-201ENST00000353479 H7C1Q1 480 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 HYAL3O43820 417 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 BDH1Q02338 343 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 ZNF141Q15928 474 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 M1APQ8TC57 530 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 BRCA1P38398 1863 aaKnown RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 CYR61O00622 381 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 TSPAN9O75954 239 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 FABP5Q01469 135 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 FMODQ06828 376 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 RHEBQ15382 184 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 CPEB3Q8NE35 698 aaKnown RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 SDSLQ96GA7 329 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 RASL10BQ96S79 203 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 KIR2DL3P43628 341 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 C21orf58P58505 322 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 DMRTC1Q5HYR2 192 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 TIGD3Q6B0B8 471 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 OGFOD3Q6PK18 319 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 NOXA1Q86UR1 476 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 TIMD4Q96H15 378 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 TMEFF2Q9UIK5 374 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 POLDIP2Q9Y2S7 368 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 CCR6P51684 374 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 SPATA46Q5T0L3 261 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 NUBPLQ8TB37 319 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 SLCO5A1Q9H2Y9 848 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 FGF20Q9NP95 211 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 NECAP2Q9NVZ3 263 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 RBFOX1Q9NWB1 397 aaKnown RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 CNR1P21554 472 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 CHRNB4P30926 498 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 TGFBR1P36897 503 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 MFGE8Q08431 387 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 CLPPQ16740 277 aaPredicted RBP13.42□□□□□ -0.26
COL17A1-201ENST00000353479 ELP2Q6IA86 826 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 GFOD1Q9NXC2 390 aa13.42□□□□□ -0.26
COL17A1-201ENST00000353479 ZNF732B4DXR9 585 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 LPCAT3Q6P1A2 487 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 LHFPL2Q6ZUX7 228 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 OR10D3Q8NH80 312 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 ORAI1Q96D31 301 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 CCL27Q9Y4X3 112 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 BHLHE40O14503 412 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 WNT1P04628 370 aa13.41□□□□□ -0.26
COL17A1-201ENST00000353479 ELK1P19419 428 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms