RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PNPLA2Q96AD5 504 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 NABP1Q96AH0 204 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 HAVCR1Q96D42 359 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 SFXN2Q96NB2 322 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 AGAP4Q96P64 663 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 SIGLEC12Q96PQ1 595 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 UTP23Q9BRU9 249 aaKnown RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 THAP7Q9BT49 309 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF703Q9H7S9 590 aaPredicted RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 LIN7BQ9HAP6 207 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 PLEKHA1Q9HB21 404 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 EMC7Q9NPA0 242 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 ASCL3Q9NQ33 180 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 CENPMQ9NSP4 180 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 DDX28Q9NUL7 540 aaKnown RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 STEAP1Q9UHE8 339 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 NUFIP1Q9UHK0 495 aaKnown RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 DHDHQ9UQ10 334 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 EMC9Q9Y3B6 208 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 RHBDD3Q9Y3P4 386 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 FLVCR1Q9Y5Y0 555 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 DSPP15924 2871 aaKnown RBP6.12□□□□□ -1.43
TRIM55-203ENST00000350034 PIEZO2Q9H5I5 2752 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 IGSF10Q6WRI0 2623 aa6.12□□□□□ -1.43
TRIM55-203ENST00000350034 RALGAPA1Q6GYQ0 2036 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 IGHV3-15A0A0B4J1V0 119 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 A0A1B0GTI1 187 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 A0A1B0GVC2 190 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 LOC107986453A0A1B0GWG9 222 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 LOC390937A0A1W2PQ73 354 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 MEGF11A6BM72 1044 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 A6NIN4 97 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF878C9JN71 531 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 NPIPA2E9PIF3 369 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 NPIPA3F8WFD2 350 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 BOLA2-SMG1P6H3BVE0 249 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SLC17A2O00624 439 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 EIF1AYO14602 144 aaKnown RBP6.11□□□□□ -1.43
TRIM55-203ENST00000350034 LDLRAD4O15165 306 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 RER1O15258 196 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 CXCL13O43927 109 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 NME2P1O60361 137 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 CYTIPO60759 359 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 CD2P06729 351 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 ACSM4P0C7M7 580 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 UBCP0CG48 685 aaKnown RBP6.11□□□□□ -1.43
TRIM55-203ENST00000350034 TRAPPC2P0DI81 140 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 TRAPPC2BP0DI82 140 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 PRKAR1AP10644 381 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 MSR1P21757 451 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SDHBP21912 280 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 CCL1P22362 96 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 NME2P22392 152 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 ITGA3P26006 1051 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 GDF1P27539 372 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 NTF4P34130 210 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 PTH2RP49190 550 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 STARP49675 285 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SELENOPP49908 381 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 RIPPLY3P57055 190 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 MRPS34P82930 218 aaKnown RBP6.11□□□□□ -1.43
TRIM55-203ENST00000350034 CD300CQ08708 224 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 GPR176Q14439 515 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 TOMM20Q15388 145 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 ODF4Q2M2E3 257 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 PLA1AQ53H76 456 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 C1orf100Q5SVJ3 147 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 BCL2L15Q5TBC7 163 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 FAM27BQ5VT28 67 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 MZT2BQ6NZ67 158 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF529Q6P280 563 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 KLHL24Q6TFL4 600 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 Q6ZSR3 168 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 PRSS45Q7RTY3 260 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SULF2Q8IWU5 870 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 DTX3Q8N9I9 347 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 DNAAF1Q8NEP3 725 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 OR6N1Q8NGY5 312 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 OR2AJ1Q8NGZ0 328 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 OR10D3Q8NH80 312 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SMIM4Q8WVI0 70 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 TSEN15Q8WW01 171 aaKnown RBP6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SLC25A28Q96A46 364 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 TMEM45BQ96B21 275 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF416Q9BWM5 594 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 PBOV1Q9GZY1 135 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 NELFAQ9H3P2 528 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 MOB1AQ9H8S9 216 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SEC61A2Q9H9S3 476 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 SLC17A5Q9NRA2 495 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 TAS2R4Q9NYW5 299 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 ASH2LQ9UBL3 628 aa6.11□□□□□ -1.43
TRIM55-203ENST00000350034 RBMX2Q9Y388 322 aaKnown RBP6.11□□□□□ -1.43
TRIM55-203ENST00000350034 FBN2P35556 2912 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 LINC00854A0A1B0GVQ3 168 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 OR5H15A6NDH6 313 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 ANXA2P2A6NMY6 339 aa6.1□□□□□ -1.43
TRIM55-203ENST00000350034 P2RY10O00398 339 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms