RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 HOXB4P17483 251 aaPredicted RBP13.89□□□□□ -0.19
RAB5C-201ENST00000346213 MYL12AP19105 171 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 CDAP32320 146 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 ETV1P50549 477 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 FABP6P51161 128 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 ADIPOQQ15848 244 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 ANKDD1AQ495B1 522 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 PLBD1Q6P4A8 553 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 SSX8Q7RTT4 187 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 PAQR4Q8N4S7 273 aaPredicted RBP13.89□□□□□ -0.19
RAB5C-201ENST00000346213 PTP4A1Q93096 173 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 MCHR2Q969V1 340 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 NABP1Q96AH0 204 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 OPALINQ96PE5 141 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 KATNB1Q9BVA0 655 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 JAM3Q9BX67 310 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 CBLN4Q9NTU7 201 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 TMEM38BQ9NVV0 291 aa13.89□□□□□ -0.19
RAB5C-201ENST00000346213 MCIDASD6RGH6 385 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 CCRL2O00421 344 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ARPC3O15145 178 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 DHHO43323 396 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 AIREO43918 545 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 OR6A2O95222 327 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 IFNGP01579 166 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ZNF3P17036 446 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 GADD45AP24522 165 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 TSTQ16762 297 aaKnown RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 VHLLQ6RSH7 139 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 FAM169BQ8N8A8 192 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 SLC37A3Q8NCC5 494 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ZNF519Q8TB69 540 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 NANOS1Q8WY41 292 aaKnown RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 RPL3LQ92901 407 aaKnown RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ADAD1Q96M93 576 aaKnown RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ERMAPQ96PL5 475 aaPredicted RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 GPX7Q96SL4 187 aaPredicted RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 KCNK17Q96T54 332 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ISYNA1Q9NPH2 558 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 NRIP3Q9NQ35 241 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 INIPQ9NRY2 104 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 CA10Q9NS85 328 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 KLHL21Q9UJP4 597 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ADAM18Q9Y3Q7 739 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 IGHV4-30-2A0A087WSY4 118 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 H7C1C5 153 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ARHGEF9O43307 516 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 IDH3BO43837 385 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 GPRIN2O60269 458 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 IGHA1P01876 353 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 CD79AP11912 226 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 FOSL1P15407 271 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 NOS3P29474 1203 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 THBS4P35443 961 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 CAPZA2P47755 286 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ZNF133P52736 654 aaPredicted RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 WNT4P56705 351 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 VBP1P61758 197 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 LSM3P62310 102 aaKnown RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 LCN6P62502 163 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 MLLT11Q13015 90 aaPredicted RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 DOC2BQ14184 412 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 CLEC12BQ2HXU8 276 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 OTPQ5XKR4 325 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 SLC22A24Q8N4F4 322 aa13.88□□□□□ -0.19
RAB5C-201ENST00000346213 ZNF346Q9UL40 294 aaKnown RBP13.88□□□□□ -0.19
RAB5C-201ENST00000346213 C2CD3Q4AC94 2353 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 SLC22A31A6NKX4 558 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 RNF223E7ERA6 249 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 J3QRE1 110 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 HIST1H2ABP04908 130 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 LIMS3P0CW19 117 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 LIMS4P0CW20 117 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 PAICSP22234 425 aaKnown RBP13.87□□□□□ -0.19
RAB5C-201ENST00000346213 NCS1P62166 190 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 CRMP1Q14194 572 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 SSX1Q16384 188 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 C3orf36Q3SXR2 165 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 TIMM50Q3ZCQ8 353 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 ALG10Q5BKT4 473 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 ZNF544Q6NX49 715 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 HIST3H2AQ7L7L0 130 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 ZCCHC24Q8N2G6 241 aaKnown RBP13.87□□□□□ -0.19
RAB5C-201ENST00000346213 OR4F15Q8NGB8 312 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 TBC1D15Q8TC07 691 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 DYNC2LI1Q8TCX1 351 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 HIST1H2ACQ93077 130 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 OTULINQ96BN8 352 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 FBXO17Q96EF6 278 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 SORCS2Q96PQ0 1159 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 HCAR1Q9BXC0 346 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 MED20Q9H944 212 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 IER3IP1Q9Y5U9 82 aa13.87□□□□□ -0.19
RAB5C-201ENST00000346213 SVEP1Q4LDE5 3571 aa13.86□□□□□ -0.19
RAB5C-201ENST00000346213 CUBNO60494 3623 aa13.86□□□□□ -0.19
RAB5C-201ENST00000346213 CCDC182A6NF36 153 aa13.86□□□□□ -0.19
RAB5C-201ENST00000346213 TMCC2O75069 709 aa13.86□□□□□ -0.19
RAB5C-201ENST00000346213 APOL3O95236 402 aa13.86□□□□□ -0.19
RAB5C-201ENST00000346213 IGHMP01871 453 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms