RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 LINC00346Q8IVM7 164 aa11.98□□□□□ -0.49
TPM4-202ENST00000344824 TIGD4Q8IY51 512 aa11.98□□□□□ -0.49
TPM4-202ENST00000344824 LRRC18Q8N456 261 aa11.98□□□□□ -0.49
TPM4-202ENST00000344824 RFLNBQ8N5W9 214 aa11.98□□□□□ -0.49
TPM4-202ENST00000344824 FOXB1Q99853 325 aa11.98□□□□□ -0.49
TPM4-202ENST00000344824 FGF20Q9NP95 211 aaPredicted RBP11.98□□□□□ -0.49
TPM4-202ENST00000344824 POLE4Q9NR33 117 aa11.98□□□□□ -0.49
TPM4-202ENST00000344824 MRPS18AQ9NVS2 196 aaKnown RBP11.98□□□□□ -0.49
TPM4-202ENST00000344824 COPS3Q9UNS2 423 aa11.98□□□□□ -0.49
TPM4-202ENST00000344824 MTORP42345 2549 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 A0A087WXM4 84 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 ARPC4-TTLL3A0A0A6YYG9 625 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 DAPL1A0PJW8 107 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 ZNF593O00488 134 aaPredicted RBP11.97□□□□□ -0.49
TPM4-202ENST00000344824 MYL12AP19105 171 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 ENTPD1P49961 510 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 ETV1P50549 477 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 FABP6P51161 128 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 TMEM154Q6P9G4 183 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 CORO6Q6QEF8 472 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 PRSS48Q7RTY5 328 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 DPY19L4Q7Z388 723 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 FBXL14Q8N1E6 418 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 Q96MF0 132 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 CDADC1Q9BWV3 514 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 CHCHD3Q9NX63 227 aaKnown RBP11.97□□□□□ -0.49
TPM4-202ENST00000344824 CLEC2DQ9UHP7 191 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 KCNG2Q9UJ96 466 aa11.97□□□□□ -0.49
TPM4-202ENST00000344824 DIMT1Q9UNQ2 313 aaKnown RBP11.97□□□□□ -0.49
TPM4-202ENST00000344824 A0A1W2PQL4 384 aaPredicted RBP11.96□□□□□ -0.49
TPM4-202ENST00000344824 E7EQL1 145 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 ZNF670-ZNF695F2Z2N8 137 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 HLA-HP01893 362 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 CRYAAP02489 173 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 CELA3BP08861 270 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 CECR9P0C854 216 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 DANCRP0C864 163 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 MSR1P21757 451 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 DCKP27707 260 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 EIF2B1Q14232 305 aaKnown RBP11.96□□□□□ -0.49
TPM4-202ENST00000344824 SHEQ5VZ18 495 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 VHLLQ6RSH7 139 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 KCTD8Q6ZWB6 473 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 SPATC1Q76KD6 591 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 SSX6Q7RTT6 188 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 MDP1Q86V88 176 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 SPARTQ8N0X7 666 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 ACBD7Q8N6N7 88 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 THEM6Q8WUY1 208 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 NANOS1Q8WY41 292 aaKnown RBP11.96□□□□□ -0.49
TPM4-202ENST00000344824 NABP1Q96AH0 204 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 TRMT61AQ96FX7 289 aaKnown RBP11.96□□□□□ -0.49
TPM4-202ENST00000344824 SH3GL3Q99963 347 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 MRPS26Q9BYN8 205 aaKnown RBP11.96□□□□□ -0.49
TPM4-202ENST00000344824 MARCH7Q9H992 704 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 TMEM38BQ9NVV0 291 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 SCOCQ9UIL1 159 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 LAMP5Q9UJQ1 280 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 KLHDC2Q9Y2U9 406 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 EXOSC1Q9Y3B2 195 aaKnown RBP11.96□□□□□ -0.49
TPM4-202ENST00000344824 PCDHGB1Q9Y5G3 927 aa11.96□□□□□ -0.49
TPM4-202ENST00000344824 ARFGEF3Q5TH69 2177 aa11.96□□□□□ -0.5
TPM4-202ENST00000344824 ZNF503-AS2A6NEH8 195 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 TRIM64A6NGJ6 449 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 J3QRE1 110 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 PSMD9O00233 223 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 MYL12BO14950 172 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 MAGEB4O15481 346 aaPredicted RBP11.95□□□□□ -0.5
TPM4-202ENST00000344824 IGHA1P01876 353 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 OR2T7P0C7T2 308 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 ACTC1P68032 377 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 ACTA1P68133 377 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 ZNF85Q03923 595 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 NEDD8Q15843 81 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 AGAP6Q5VW22 663 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 MYPOPQ86VE0 399 aaPredicted RBP11.95□□□□□ -0.5
TPM4-202ENST00000344824 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 SVOPQ8N4V2 548 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 OR2T27Q8NH04 317 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 SIGLEC11Q96RL6 698 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 DHRS9Q9BPW9 319 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 TRAF4Q9BUZ4 470 aaPredicted RBP11.95□□□□□ -0.5
TPM4-202ENST00000344824 ALG8Q9BVK2 526 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 ZNF416Q9BWM5 594 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 GSX2Q9BZM3 304 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 YIPF3Q9GZM5 350 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 ERVK13-1Q9NX77 482 aa11.95□□□□□ -0.5
TPM4-202ENST00000344824 SMAD7O15105 426 aaKnown RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 PTHP01270 115 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 NPR2P20594 1047 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 TTKP33981 857 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 MRPS34P82930 218 aaKnown RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 NAAAQ02083 359 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 ENDOGQ14249 297 aaKnown RBP11.94□□□□□ -0.5
TPM4-202ENST00000344824 OR2G6Q5TZ20 316 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 DCXRQ7Z4W1 244 aa11.94□□□□□ -0.5
TPM4-202ENST00000344824 MUC15Q8N387 334 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms