RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FOXH1O75593 365 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 UBOX5O94941 541 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 IGHV2-5P01817 119 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 HLA-DQA2P01906 255 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 FABP3P05413 133 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 DBHP09172 617 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 CDK5R2Q13319 367 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 MEP1BQ16820 701 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 CCDC92Q53HC0 331 aaPredicted RBP10.51□□□□□ -0.73
SGCA-202ENST00000344627 SPRNQ5BIV9 151 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 PGAM4Q8N0Y7 254 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 OR5AS1Q8N127 324 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 BPIFB2Q8N4F0 458 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 ATG16L2Q8NAA4 619 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 OR4K13Q8NH42 304 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 ST7LQ8TDW4 575 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 PTP4A1Q93096 173 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 DHRS1Q96LJ7 313 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 SAMD8Q96LT4 415 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 COG8Q96MW5 612 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
SGCA-202ENST00000344627 GPA33Q99795 319 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 CDADC1Q9BWV3 514 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 ARL8BQ9NVJ2 186 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 PTTG3PQ9NZH4 202 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 KLHL21Q9UJP4 597 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 ARL2BPQ9Y2Y0 163 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 TANC2Q9HCD6 1990 aa10.51□□□□□ -0.73
SGCA-202ENST00000344627 LOC105371242A0A075B767 164 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 ARPC2O15144 300 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 SURF4O15260 269 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 DCTN3O75935 186 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 CD55P08174 381 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 HSD17B1P14061 328 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 RRM2P31350 389 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 LCN2P80188 198 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 FOXL1Q12952 345 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 HNRNPA0Q13151 305 aaKnown RBP10.5□□□□□ -0.73
SGCA-202ENST00000344627 HLXQ14774 488 aaPredicted RBP10.5□□□□□ -0.73
SGCA-202ENST00000344627 RFX4Q33E94 735 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 SLC35F1Q5T1Q4 408 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 C16orf89Q6UX73 402 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 RBMS3Q6XE24 437 aaKnown RBP10.5□□□□□ -0.73
SGCA-202ENST00000344627 ZDHHC21Q8IVQ6 265 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 DEFB107AQ8IZN7 70 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 GJC3Q8NFK1 279 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 OR5L1Q8NGL2 311 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 GNPDA2Q8TDQ7 276 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 POP5Q969H6 163 aaKnown RBP10.5□□□□□ -0.73
SGCA-202ENST00000344627 HAVCR1Q96D42 359 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 NMNAT3Q96T66 252 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 TMPRSS13Q9BYE2 586 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 RPRD1BQ9NQG5 326 aaKnown RBP10.5□□□□□ -0.73
SGCA-202ENST00000344627 DDX28Q9NUL7 540 aaKnown RBP10.5□□□□□ -0.73
SGCA-202ENST00000344627 FAM53CQ9NYF3 392 aa10.5□□□□□ -0.73
SGCA-202ENST00000344627 OR6C6A6NF89 314 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 IFNL4K9M1U5 179 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 TXNDC12O95881 172 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 HIST1H1CP16403 213 aaKnown RBP10.49□□□□□ -0.73
SGCA-202ENST00000344627 TNFRSF1AP19438 455 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 KITLGP21583 273 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 RBMXP38159 391 aaKnown RBP10.49□□□□□ -0.73
SGCA-202ENST00000344627 RGS6P49758 472 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 FXYD6P3P58550 94 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 DBPQ10586 325 aaPredicted RBP10.49□□□□□ -0.73
SGCA-202ENST00000344627 OR2T2Q6IF00 324 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 PGM2L1Q6PCE3 622 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 CYP2R1Q6VVX0 501 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 SPICQ8N5J4 248 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 SDR9C7Q8NEX9 313 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 OR2AJ1Q8NGZ0 328 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 ITLN1Q8WWA0 313 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 PITX2Q99697 317 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 FUZQ9BT04 418 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 FN3KQ9H479 309 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 C7orf69Q9H7B7 122 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 TMEM106BQ9NUM4 274 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 DCAF16Q9NXF7 216 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 NDE1Q9NXR1 346 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 CD300AQ9UGN4 299 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 B9D1Q9UPM9 204 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 PPP1R3CQ9UQK1 317 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 POLR3KQ9Y2Y1 108 aaPredicted RBP10.49□□□□□ -0.73
SGCA-202ENST00000344627 NPTNQ9Y639 398 aa10.49□□□□□ -0.73
SGCA-202ENST00000344627 F5H5K5 113 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 J3QW42 95 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 DCTN6O00399 190 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 RAC2P15153 192 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 FPR3P25089 353 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 ERFP50548 548 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 KCNMB1Q16558 191 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 SLC36A3Q495N2 470 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 TMEM155Q4W5P6 130 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 CLEC12AQ5QGZ9 265 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 SHISA2Q6UWI4 295 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 Q6ZR03 302 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 LINC00346Q8IVM7 164 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 OR6V1Q8N148 313 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms