RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SCNM1Q9BWG6 230 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 PBOV1Q9GZY1 135 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 LDAHQ9H6V9 325 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 TCF7L1Q9HCS4 588 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 TRGV5A0A0B4J1U4 118 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 ZNF878C9JN71 531 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 SLC43A1O75387 559 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 DBHP09172 617 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 CSF3P09919 207 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 IL7P13232 177 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 ZNF121P58317 390 aaPredicted RBP11.94□□□□□ -0.5
CDC42-202ENST00000344548 LSM6P62312 80 aaKnown RBP11.94□□□□□ -0.5
CDC42-202ENST00000344548 CEACAM16Q2WEN9 425 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 CCDC92Q53HC0 331 aaPredicted RBP11.94□□□□□ -0.5
CDC42-202ENST00000344548 LGALS14Q8TCE9 139 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 CALHM2Q9HA72 323 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 EXTL2Q9UBQ6 330 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 V9GY05 133 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 SPTBN4Q9H254 2564 aa11.94□□□□□ -0.5
CDC42-202ENST00000344548 IGKV3D-15A0A087WSY6 115 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 FAM25AB3EWG3 89 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 FAM25CB3EWG5 89 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 FAM25GB3EWG6 89 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 GFRA3O60609 400 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 TAB1Q15750 504 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 MZT2AQ6P582 158 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 MEIOBQ8N635 442 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 POC5Q8NA72 575 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 ACOT12Q8WYK0 555 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 KCTD12Q96CX2 325 aaKnown RBP11.93□□□□□ -0.5
CDC42-202ENST00000344548 EXO5Q9H790 373 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 CYSLTR2Q9NS75 346 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 SLC7A10Q9NS82 523 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 TAS2R4Q9NYW5 299 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 SVILO95425 2214 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 A0A1B0GTI1 187 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 A0A1W2PQ09 198 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 ISG15P05161 165 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 OCMP0CE72 109 aaPredicted RBP11.93□□□□□ -0.5
CDC42-202ENST00000344548 HIST1H3AP68431 136 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 MRPS34P82930 218 aaKnown RBP11.93□□□□□ -0.5
CDC42-202ENST00000344548 IL18Q14116 193 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 PYDC2Q56P42 97 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 BCL2L15Q5TBC7 163 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 HIST2H3PS2Q5TEC6 136 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 FAM27BQ5VT28 67 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 XKRXQ6PP77 449 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 HIST2H3AQ71DI3 136 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 PRSS45Q7RTY3 260 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 ELMOD2Q8IZ81 293 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 INTS12Q96CB8 462 aaKnown RBP11.93□□□□□ -0.5
CDC42-202ENST00000344548 TAAR6Q96RI8 345 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 ABHD1Q96SE0 405 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 KCNK15Q9H427 330 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 LIN7BQ9HAP6 207 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 TMEM38BQ9NVV0 291 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 DHDHQ9UQ10 334 aa11.93□□□□□ -0.5
CDC42-202ENST00000344548 NOSIPQ9Y314 301 aaKnown RBP11.93□□□□□ -0.5
CDC42-202ENST00000344548 AIPO00170 330 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 RAF1P04049 648 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 NPR2P20594 1047 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 MAPK3P27361 379 aaPredicted RBP11.92□□□□□ -0.5
CDC42-202ENST00000344548 HSD11B1P28845 292 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 PSMA6P60900 246 aaKnown RBP11.92□□□□□ -0.5
CDC42-202ENST00000344548 BCL2A1Q16548 175 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 TRIM16LQ309B1 348 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 DMRTC1Q5HYR2 192 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 GDPD3Q7L5L3 318 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 NUFIP2Q7Z417 695 aaKnown RBP11.92□□□□□ -0.5
CDC42-202ENST00000344548 RNF144BQ7Z419 303 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 GPR137CQ8N3F9 429 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 PLPP7Q8NBV4 271 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 OR8B12Q8NGG6 310 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 OR51E1Q8TCB6 317 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 PNPLA2Q96AD5 504 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 CCDC32Q9BV29 185 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 GPR35Q9HC97 309 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 HHLA2Q9UM44 414 aa11.92□□□□□ -0.5
CDC42-202ENST00000344548 PCDHGA9Q9Y5G4 932 aaKnown RBP11.92□□□□□ -0.5
CDC42-202ENST00000344548 DSPP15924 2871 aaKnown RBP11.92□□□□□ -0.5
CDC42-202ENST00000344548 ACOT7O00154 380 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 CDK2AP1O14519 115 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 LANCL1O43813 399 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 MRPL33O75394 65 aaKnown RBP11.91□□□□□ -0.5
CDC42-202ENST00000344548 ACTL6AO96019 429 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 ITGA5P08648 1049 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 ZNF24P17028 368 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 DCTDP32321 178 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 KLHL24Q6TFL4 600 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 LRRC28Q86X40 367 aaPredicted RBP11.91□□□□□ -0.5
CDC42-202ENST00000344548 IZUMO1Q8IYV9 350 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 SLC25A38Q96DW6 304 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 DTNBP1Q96EV8 351 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 ADAT3Q96EY9 351 aaPredicted RBP11.91□□□□□ -0.5
CDC42-202ENST00000344548 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
CDC42-202ENST00000344548 FOXB1Q99853 325 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms