RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 OR10H5Q8NGA6 315 aa17.24■□□□□ 0.35
COL9A3-201ENST00000343916 OR4D6Q8NGJ1 314 aa17.24■□□□□ 0.35
COL9A3-201ENST00000343916 IFI44Q8TCB0 444 aa17.24■□□□□ 0.35
COL9A3-201ENST00000343916 RBP7Q96R05 134 aa17.24■□□□□ 0.35
COL9A3-201ENST00000343916 MRPL13Q9BYD1 178 aaKnown RBP17.24■□□□□ 0.35
COL9A3-201ENST00000343916 PTTG3PQ9NZH4 202 aa17.24■□□□□ 0.35
COL9A3-201ENST00000343916 TTLL8A6PVC2 850 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 PATE3B3GLJ2 98 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 TPPPO94811 219 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 ISG15P05161 165 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 ACSM4P0C7M7 580 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 ACHEP22303 614 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 MSX1P28360 303 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 NHLRC1Q6VVB1 395 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 UEVLDQ8IX04 471 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 OR2M3Q8NG83 312 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 SLC22A8Q8TCC7 542 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 MARVELD3Q96A59 401 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 FGGYQ96C11 551 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 FAM206AQ9NX38 181 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 PIPOXQ9P0Z9 390 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 CYB5R1Q9UHQ9 305 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 TEX51A0A1B0GUA7 166 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 A0A1W2PNV4 684 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 SLC25A53Q5H9E4 307 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 ZNF704Q6ZNC4 412 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-201ENST00000343916 CFAP77Q6ZQR2 320 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 FTMTQ8N4E7 242 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 OR6M1Q8NGM8 313 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 NKD1Q969G9 470 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 UTP23Q9BRU9 249 aaKnown RBP17.23■□□□□ 0.35
COL9A3-201ENST00000343916 TAS2R8Q9NYW2 309 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 ZNF224Q9NZL3 707 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 C19orf25Q9UFG5 118 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-201ENST00000343916 NUP50Q9UKX7 468 aa17.23■□□□□ 0.35
COL9A3-201ENST00000343916 IFNA7P01567 189 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 TTRP02766 147 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 HRGP04196 525 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 P2RY4P51582 365 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 CLRN1P58418 232 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 PSMA6P60900 246 aaKnown RBP17.22■□□□□ 0.35
COL9A3-201ENST00000343916 CLEC1AQ8NC01 280 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 UBQLN2Q9UHD9 624 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 AKAIN1P0CW23 69 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 CPN1P15169 458 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 GNALP38405 381 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 MMP16P51512 607 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 TSPAN5P62079 268 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 OC90Q02509 493 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-201ENST00000343916 TMEM176BQ3YBM2 270 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-201ENST00000343916 TMEM244Q5VVB8 128 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 UXS1Q8NBZ7 420 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 GPX8Q8TED1 209 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 SEH1LQ96EE3 360 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 SLC26A1Q9H2B4 701 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 GPN1Q9HCN4 374 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-201ENST00000343916 FANCFQ9NPI8 374 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 SLC17A5Q9NRA2 495 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 B3GALT1Q9Y5Z6 326 aa17.22■□□□□ 0.35
COL9A3-201ENST00000343916 RTTNQ86VV8 2226 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 IGLV3-32A0A0A0MS00 114 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 DKK1O94907 266 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 ONECUT2O95948 504 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 PGA4P0DJD7 388 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 PGA3P0DJD8 388 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 LAP3P28838 519 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 GRK1Q15835 563 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 AANATQ16613 207 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 TMEM65Q6PI78 240 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 DEGS2Q6QHC5 323 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 ADGRE4PQ86SQ3 457 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 ADAT3Q96EY9 351 aaPredicted RBP17.21■□□□□ 0.35
COL9A3-201ENST00000343916 KLHL13Q9P2N7 655 aa17.21■□□□□ 0.35
COL9A3-201ENST00000343916 CHCHD2Q9Y6H1 151 aaPredicted RBP17.21■□□□□ 0.35
COL9A3-201ENST00000343916 UBCP0CG48 685 aaKnown RBP17.21■□□□□ 0.34
COL9A3-201ENST00000343916 ANOS1P23352 680 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 MECP2P51608 486 aaKnown RBP17.21■□□□□ 0.34
COL9A3-201ENST00000343916 CLLU1Q5K131 121 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 PXDC1Q5TGL8 231 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 STEAP1BQ6NZ63 245 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 SLC36A1Q7Z2H8 476 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 ACBD4Q8NC06 268 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 OR4K17Q8NGC6 315 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 ELP5Q8TE02 316 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 NAT6Q93015 286 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 B3GNT4Q9C0J1 378 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 CHST6Q9GZX3 395 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 PBOV1Q9GZY1 135 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 C1orf198Q9H425 327 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 PTGES2Q9H7Z7 377 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 CNTD2Q9H8S5 307 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 POLR1DQ9Y2S0 133 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 LHFPL6Q9Y693 200 aa17.21■□□□□ 0.34
COL9A3-201ENST00000343916 TRAF3IP2O43734 574 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-201ENST00000343916 SIX6O95475 246 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 IL5P05113 134 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 SLC2A1P11166 492 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 CCL4P13236 92 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 PCOLCEQ15113 449 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 C2orf68Q2NKX9 166 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms