RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CNN2Q99439 309 aaKnown RBP11.69□□□□□ -0.54
COL18A1-201ENST00000342220 BEX1Q9HBH7 125 aa11.69□□□□□ -0.54
COL18A1-201ENST00000342220 TRABD2BA6NFA1 517 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 ABCD4O14678 606 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 TFP02787 698 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 RLN2P04090 185 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 RFPL3SP0C7P2 107 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 CD53P19397 219 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 CDAP32320 146 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 RBM34P42696 430 aaKnown RBP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 ADAM8P78325 824 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 CACNG6Q9BXT2 260 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF436Q9C0F3 470 aaPredicted RBP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 OR51J1Q9H342 316 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 KIF25Q9UIL4 384 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 COA3Q9Y2R0 106 aaPredicted RBP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 AK6Q9Y3D8 172 aaKnown RBP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 TNFSF11O14788 317 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 MT-ND4P03905 459 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 FBXO45P0C2W1 286 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 FOXC1Q12948 553 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 OR7E24Q6IFN5 339 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 DPY19L2P2Q6ZN68 376 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 SLC35F2Q8IXU6 374 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 ZFP82Q8N141 532 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 OR6V1Q8N148 313 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 OR5T2Q8NGG2 359 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 OR6N1Q8NGY5 312 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 THAP4Q8WY91 577 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 DDIT4LQ96D03 193 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 EML6Q6ZMW3 1958 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 B4E171 279 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 EIF3GO75821 320 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 SNAPINO95295 136 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 POU3F2P20265 443 aaPredicted RBP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 PTAFRP25105 342 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 TSPAN7P41732 249 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 PRKXP51817 358 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 ARG2P78540 354 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 HFEQ30201 348 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 HES5Q5TA89 166 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 FNDC7Q5VTL7 733 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 TMEM88Q6PEY1 159 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 OR2T4Q8NH00 348 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 ROBO4Q8WZ75 1007 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 PPP1R14AQ96A00 147 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 NARS2Q96I59 477 aaKnown RBP11.68□□□□□ -0.54
COL18A1-201ENST00000342220 PRRG4Q9BZD6 226 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 NUBP2Q9Y5Y2 271 aa11.68□□□□□ -0.54
COL18A1-201ENST00000342220 TRBV2A0A0J9YWF9 115 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 OR6C65A6NJZ3 312 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 EPXP11678 715 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF43P17038 809 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 FHL1Q13642 323 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 CSRP2Q16527 193 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 MESTQ5EB52 335 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ALKAL2Q6UX46 152 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 WDSUB1Q8N9V3 476 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 OR6S1Q8NH40 331 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 PELI1Q96FA3 418 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 IMMP1LQ96LU5 166 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 SLC25A18Q9H1K4 315 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 DEFB127Q9H1M4 99 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 AUNIPQ9H7T9 357 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 WDR54Q9H977 334 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 MRPL15Q9P015 296 aaKnown RBP11.67□□□□□ -0.54
COL18A1-201ENST00000342220 KCNG2Q9UJ96 466 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 DOCK10Q96BY6 2186 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF726A6NNF4 738 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 SLC2A1P11166 492 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 KCNJ3P48549 501 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 SSPNQ14714 243 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 DEFB109BQ30KR1 87 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF441Q8N8Z8 693 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ELP5Q8TE02 316 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 PMM1Q92871 262 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 MRPL48Q96GC5 212 aaKnown RBP11.67□□□□□ -0.54
COL18A1-201ENST00000342220 OR14A2Q96R54 314 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 EMC7Q9NPA0 242 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ACOD1A6NK06 481 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 EFNA2O43921 213 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
COL18A1-201ENST00000342220 UBL3O95164 117 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 SIX6O95475 246 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ADRB1P08588 477 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 ACAA1P09110 424 aaPredicted RBP11.67□□□□□ -0.54
COL18A1-201ENST00000342220 EIF1P41567 113 aaKnown RBP11.67□□□□□ -0.54
COL18A1-201ENST00000342220 C3P1Q6ZMU1 363 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 STX12Q86Y82 276 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 LRRC18Q8N456 261 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 NPEPL1Q8NDH3 523 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 GCDHQ92947 438 aaPredicted RBP11.67□□□□□ -0.54
COL18A1-201ENST00000342220 CMSS1Q9BQ75 279 aaKnown RBP11.67□□□□□ -0.54
COL18A1-201ENST00000342220 TAS2R5Q9NYW4 299 aa11.67□□□□□ -0.54
COL18A1-201ENST00000342220 HTR3BO95264 441 aa11.66□□□□□ -0.54
COL18A1-201ENST00000342220 ZNF883P0CG24 379 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms