RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 OR51A2Q8NGJ7 313 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 OR4C16Q8NGL9 310 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 POC1BQ8TC44 478 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 C5orf34Q96MH7 638 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 HEXA-AS1Q9H8Q6 139 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 SLC17A5Q9NRA2 495 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 OR52A1Q9UKL2 312 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 ELF5Q9UKW6 265 aaPredicted RBP13.36□□□□□ -0.27
TPM3-208ENST00000341485 LOC107986453A0A1B0GWG9 222 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 AQP8O94778 261 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 IL5P05113 134 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 CD2P06729 351 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 CD37P11049 281 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 MECP2P51608 486 aaKnown RBP13.36□□□□□ -0.27
TPM3-208ENST00000341485 C19orf57Q0VDD7 668 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 PLPPR5Q32ZL2 321 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 ZBTB37Q5TC79 503 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 GLT8D1Q68CQ7 371 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 CORO6Q6QEF8 472 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 IL22RA1Q8N6P7 574 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 OR13C3Q8NGS6 347 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 OR2T35Q8NGX2 323 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 SLC25A44Q96H78 314 aaPredicted RBP13.36□□□□□ -0.27
TPM3-208ENST00000341485 MED30Q96HR3 178 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 POTEKPQ9BYX7 375 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 ALKBH4Q9NXW9 302 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 CKLFQ9UBR5 152 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 CGGBP1Q9UFW8 167 aaPredicted RBP13.36□□□□□ -0.27
TPM3-208ENST00000341485 HHLA2Q9UM44 414 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 WIF1Q9Y5W5 379 aa13.36□□□□□ -0.27
TPM3-208ENST00000341485 MRPS18BQ9Y676 258 aaKnown RBP13.36□□□□□ -0.27
TPM3-208ENST00000341485 LMX1BO60663 402 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 CSF1P09603 554 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 ACHEP22303 614 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 ZNF41P51814 821 aaPredicted RBP13.35□□□□□ -0.27
TPM3-208ENST00000341485 BIDP55957 195 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 MLF1P58340 268 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 SLC25A53Q5H9E4 307 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 LRFN4Q6PJG9 635 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 NHLRC1Q6VVB1 395 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 OR4D10Q8NGI6 311 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 EMC6Q9BV81 110 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 ATG5Q9H1Y0 275 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 SERINC1Q9NRX5 453 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 KLHL13Q9P2N7 655 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 B3GAT1Q9P2W7 334 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 MGAT4CQ9UBM8 478 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 ZNF69Q9UC07 566 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 MEIS3P1A6NDR6 274 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 PYCARD-AS1I3L0S3 204 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 ISG15P05161 165 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 VSIG10L2P0DP72 767 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 CPN1P15169 458 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 HTR2CP28335 458 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 MSX1P28360 303 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 FAUP35544 74 aaKnown RBP13.35□□□□□ -0.27
TPM3-208ENST00000341485 TOMM20Q15388 145 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 INPP5JQ15735 1006 aaPredicted RBP13.35□□□□□ -0.27
TPM3-208ENST00000341485 GLYATL3Q5SZD4 288 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 ZNF626Q68DY1 528 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 TEX261Q6UWH6 196 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 SPICQ8N5J4 248 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 MRGPRX4Q96LA9 322 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 CHIAQ9BZP6 476 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 FAM117AQ9C073 453 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 FANCFQ9NPI8 374 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 CA10Q9NS85 328 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 HPF1Q9NWY4 346 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 TAS2R8Q9NYW2 309 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 PIPOXQ9P0Z9 390 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 EIF3KQ9UBQ5 218 aaKnown RBP13.35□□□□□ -0.27
TPM3-208ENST00000341485 B3GALT5Q9Y2C3 310 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 U3KQ87 197 aa13.35□□□□□ -0.27
TPM3-208ENST00000341485 IGLV3-32A0A0A0MS00 114 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 TMEM269A0A1B0GVZ9 245 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 A0A1W2PNV4 684 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 EIF1AYO14602 144 aaKnown RBP13.34□□□□□ -0.27
TPM3-208ENST00000341485 TERTO14746 1132 aaKnown RBP13.34□□□□□ -0.27
TPM3-208ENST00000341485 TOXO94900 526 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 CD82P27701 267 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 PRSS3P35030 304 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 DNASE1L1P49184 302 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 SPOCK1Q08629 439 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 Q0VFX4 171 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 CHAF1BQ13112 559 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 MYBPHQ13203 477 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
TPM3-208ENST00000341485 RNF133Q8WVZ7 376 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 C11orf40Q8WZ69 217 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 SORCS2Q96PQ0 1159 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 CENPMQ9NSP4 180 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 CHCHD2Q9Y6H1 151 aaPredicted RBP13.34□□□□□ -0.27
TPM3-208ENST00000341485 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
TPM3-208ENST00000341485 P2RY10O00398 339 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 CREBL2O60519 120 aaPredicted RBP13.33□□□□□ -0.27
TPM3-208ENST00000341485 OPN1LWP04000 364 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 HRGP04196 525 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 SERPINA7P05543 415 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms