RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 CLDN17P56750 224 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 C4orf46Q504U0 113 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 GLDNQ6ZMI3 551 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 CD163Q86VB7 1156 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 MAML2Q8IZL2 1156 aaPredicted RBP9.2□□□□□ -0.94
LIMA1-201ENST00000341247 TMEM156Q8N614 296 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 NAT6Q93015 286 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 PBOV1Q9GZY1 135 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 CNTD2Q9H8S5 307 aa9.2□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF208O43345 1280 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 LAP3P28838 519 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 MRPS10P82664 201 aaKnown RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ZP4Q12836 540 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 PCOLCEQ15113 449 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 SLC22A6Q4U2R8 563 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 OLFML2AQ68BL7 652 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 C11orf88Q6PI97 169 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 CREB3L2Q70SY1 520 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ABHD12BQ7Z5M8 362 aaPredicted RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 GALNT16Q8N428 558 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 LRRC18Q8N456 261 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 OR2AJ1Q8NGZ0 328 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 SLC25A28Q96A46 364 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 C1orf198Q9H425 327 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF160Q9HCG1 818 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF726A6NNF4 738 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 LAMTOR5O43504 91 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 SRSF10O75494 262 aaKnown RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ALX3O95076 343 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 IGHG1P01857 330 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 FAUP35544 74 aaKnown RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 MAP2K6P52564 334 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 SUMO3P55854 103 aaPredicted RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 PMPCAQ10713 525 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 STEAP1BQ6NZ63 245 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 MRPL14Q6P1L8 145 aaKnown RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 TNFAIP8L1Q8WVP5 186 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 RNF133Q8WVZ7 376 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 UCN2Q96RP3 112 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 MICU1Q9BPX6 476 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 SCP2D1Q9UJQ7 156 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 LHFPL6Q9Y693 200 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 CHCHD2Q9Y6H1 151 aaPredicted RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 A0A1B0GUH1 482 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 C5orf63A6NC05 138 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 D6RAR5 112 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 WDPCPO95876 746 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 AMY2AP04746 511 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 UMODP07911 640 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 PNLIPP16233 465 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 PER3P56645 1201 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 PRSS12P56730 875 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ANGPT1Q15389 498 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ELFN2Q5R3F8 820 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF468Q5VIY5 522 aaPredicted RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 NAA40Q86UY6 237 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 GVQW1Q8N7I0 195 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 OR1J2Q8NGS2 313 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 CYB5R1Q9UHQ9 305 aa9.19□□□□□ -0.94
LIMA1-201ENST00000341247 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
LIMA1-201ENST00000341247 PMS2P1A4D2B8 440 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 HSPB2A8KAH6 182 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 TNFRSF10AO00220 468 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 TRAF3IP2O43734 574 aaPredicted RBP9.18□□□□□ -0.94
LIMA1-201ENST00000341247 LDOC1O95751 146 aaPredicted RBP9.18□□□□□ -0.94
LIMA1-201ENST00000341247 AKAIN1P0CW23 69 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ACHEP22303 614 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ENPP1P22413 925 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 RBMS2Q15434 407 aaKnown RBP9.18□□□□□ -0.94
LIMA1-201ENST00000341247 HSPB2Q16082 182 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 CSRP2Q16527 193 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 TMEM244Q5VVB8 128 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 FAM198BQ6UWH4 519 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF704Q6ZNC4 412 aaPredicted RBP9.18□□□□□ -0.94
LIMA1-201ENST00000341247 OR5D18Q8NGL1 313 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 NUDCD2Q8WVJ2 157 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 SEH1LQ96EE3 360 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 POTEKPQ9BYX7 375 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 FAM206AQ9NX38 181 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF319Q9P2F9 582 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 NCOA6Q14686 2063 aaPredicted RBP9.18□□□□□ -0.94
LIMA1-201ENST00000341247 G3V3Q6 166 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 GOSR2O14653 212 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 MPC2O95563 127 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 RAB3DO95716 219 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 TGM6O95932 706 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 CFDP00746 253 aaPredicted RBP9.18□□□□□ -0.94
LIMA1-201ENST00000341247 CSF1P09603 554 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 IGFBP3P17936 291 aaPredicted RBP9.18□□□□□ -0.94
LIMA1-201ENST00000341247 RAG2P55895 527 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 GNG2P59768 71 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 GPR85P60893 370 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 OR52W1Q6IF63 320 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 FAM57BQ71RH2 274 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ADGRE4PQ86SQ3 457 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF101Q8IZC7 436 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 GABRG1Q8N1C3 465 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF283Q8N7M2 679 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 AGBL5Q8NDL9 886 aa9.18□□□□□ -0.94
LIMA1-201ENST00000341247 ZNF680Q8NEM1 530 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms