RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 H3BSH0 61 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 FAAHO00519 579 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 MFAP3LO75121 409 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 STX11O75558 287 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 RPS5P46782 204 aaKnown RBP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 CSNK1A1P48729 337 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 GDI2P50395 445 aaKnown RBP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 KCNJ10P78508 379 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 EWSR1Q01844 656 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 TP53BP2Q13625 1128 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 FRG1Q14331 258 aaKnown RBP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 TAF11Q15544 211 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 OR8B8Q15620 311 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 FAM153CQ494X1 144 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 CMC1Q7Z7K0 106 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 ZNF429Q86V71 674 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 FAM90A1Q86YD7 464 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 SGPP2Q8IWX5 399 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 UEVLDQ8IX04 471 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 C10orf111Q8N326 155 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 FAM71E2Q8N5Q1 922 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 PTGR2Q8N8N7 351 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 BOLLQ8N9W6 283 aaKnown RBP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 OR8U1Q8NH10 309 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 AKR7LQ8NHP1 331 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 ABCB10Q9NRK6 738 aa8.62□□□□□ -1.03
ATXN3-201ENST00000340660 FAF1Q9UNN5 650 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 POLR3HQ9Y535 204 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-201ENST00000340660 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 NPIPB8E9PQR5 432 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 M0R1W7 72 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 NDUFA2O43678 99 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 ENTPD5O75356 428 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 OR4F21O95013 312 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 AHSA1O95433 338 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 SLPIP03973 132 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 GSTM3P21266 225 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 CXCR5P32302 372 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 ARHGDIAP52565 204 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 MS4A18Q3C1V0 323 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 ABCA11PQ4W5N1 156 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 CENPLQ8N0S6 344 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-201ENST00000340660 LRRC18Q8N456 261 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 ZNF645Q8N7E2 425 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 TMEM54Q969K7 222 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 HAVCR1Q96D42 359 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 PHF21BQ96EK2 531 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 C4orf45Q96LM5 186 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 UFSP2Q9NUQ7 469 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 KAAG1Q9UBP8 84 aa8.61□□□□□ -1.03
ATXN3-201ENST00000340660 OOEPA6NGQ2 149 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 AIM2O14862 343 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 XRCC3O43542 346 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 OR3A4PP47883 348 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 RAD23AP54725 363 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 EGR4Q05215 589 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 EPS8Q12929 822 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 MAB21L1Q13394 359 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 TOP3AQ13472 1001 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-201ENST00000340660 MPPED2Q15777 294 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 PRAMEF6Q5VXH4 476 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 TYW3Q6IPR3 259 aaKnown RBP8.6□□□□□ -1.03
ATXN3-201ENST00000340660 OR11L1Q8NGX0 322 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 NABP1Q96AH0 204 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 DCLRE1BQ9H816 532 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 ELOVL3Q9HB03 270 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 LMBRD1Q9NUN5 540 aa8.6□□□□□ -1.03
ATXN3-201ENST00000340660 PRPF19Q9UMS4 504 aaKnown RBP8.6□□□□□ -1.03
ATXN3-201ENST00000340660 TRAV38-1A0A0B4J264 116 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 FAM90A8PA6NJQ4 464 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 C12orf77C9JDV5 145 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 G3V2L1 256 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 AMY2AP04746 511 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 KRT16P08779 473 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 ZNF32P17041 273 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 AMY2BP19961 511 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 GRPRP30550 384 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 POU3F4P49335 361 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 KIR2DS1Q14954 304 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 HHATQ5VTY9 493 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 NXNQ6DKJ4 435 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 TTC27Q6P3X3 843 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 H1FNTQ75WM6 255 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-201ENST00000340660 OR13G1Q8NGZ3 307 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 ZNF764Q96H86 408 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-201ENST00000340660 GLTPQ9NZD2 209 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 IFNKQ9P0W0 207 aa8.59□□□□□ -1.03
ATXN3-201ENST00000340660 CFAP73A6NFT4 308 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 ZNF726A6NNF4 738 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 KRT6AP02538 564 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 KRT6BP04259 564 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 IGF1P05019 195 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 KRT6CP48668 564 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 PSG4Q00888 419 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 GUCY1A3Q02108 690 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 SPA17Q15506 151 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 GSTA3Q16772 222 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 LDLRAD2Q5SZI1 272 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms