RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 GABARAPL3Q9BY60 117 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 OR2J1Q9GZK6 312 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 BARX1Q9HBU1 254 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 DYNLRB1Q9NP97 96 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 FBXO9Q9UK97 447 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-201ENST00000340074 CR1P17927 2039 aa13.08□□□□□ -0.32
UBE3B-201ENST00000340074 ACANP16112 2415 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 IGLV3-9A0A075B6K5 115 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 A0A1W2PPW3 197 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 M0R233 179 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 PRODHO43272 600 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 LY6HO94772 140 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 BAG2O95816 211 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 SLC2A5P22732 501 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 SELENOVP59797 346 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 CLEC12BQ2HXU8 276 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 ALKBH6Q3KRA9 238 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 ZNF718Q3SXZ3 478 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 TMEM255AQ5JRV8 349 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 TEX30Q5JUR7 227 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 C12orf73Q69YU5 71 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 DCXRQ7Z4W1 244 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 CBR4Q8N4T8 237 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 OR10S1Q8NGN2 331 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 OR6N2Q8NGY6 317 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 KLF14Q8TD94 323 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-201ENST00000340074 INTS14Q96SY0 518 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 POFUT1Q9H488 388 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 MARCH7Q9H992 704 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 USE1Q9NZ43 259 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 TAAR3PQ9P1P4 343 aa13.07□□□□□ -0.32
UBE3B-201ENST00000340074 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 TRIM64BA6NI03 449 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 F5H5K5 113 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 TLX2O43763 284 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-201ENST00000340074 SELENOFO60613 162 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 F12P00748 615 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-201ENST00000340074 GCH1P30793 250 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 MPV17P39210 176 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 ALDH3A2P51648 485 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 EFNA4P52798 201 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 RPS7P62081 194 aaKnown RBP13.06□□□□□ -0.32
UBE3B-201ENST00000340074 EFNB1P98172 346 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 ECH1Q13011 328 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 APOFQ13790 326 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 KRTAP27-1Q3LI81 207 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 MBNL2Q5VZF2 373 aaKnown RBP13.06□□□□□ -0.32
UBE3B-201ENST00000340074 DPY19L4Q7Z388 723 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 TIGD4Q8IY51 512 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 TCEANCQ8N8B7 351 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 IPCEF1Q8WWN9 437 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-201ENST00000340074 DCLRE1CQ96SD1 692 aaKnown RBP13.06□□□□□ -0.32
UBE3B-201ENST00000340074 TMUB1Q9BVT8 246 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 RAB1BQ9H0U4 201 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 TPK1Q9H3S4 243 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 MS4A5Q9H3V2 200 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 STARD10Q9Y365 291 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 ORC6Q9Y5N6 252 aa13.06□□□□□ -0.32
UBE3B-201ENST00000340074 YLPM1P49750 1951 aaKnown RBP13.06□□□□□ -0.32
UBE3B-201ENST00000340074 IGHV3-13P01766 116 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 NAT2P11245 290 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 CD99P14209 185 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 NKPD1Q17RQ9 610 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 SLC35D3Q5M8T2 416 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 DNM1P46Q6ZS02 220 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 BCDIN3DQ7Z5W3 292 aaKnown RBP13.05□□□□□ -0.32
UBE3B-201ENST00000340074 NAA40Q86UY6 237 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 LURAP1LQ8IV03 231 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 ZNF525Q8N782 197 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 TMEM163Q8TC26 289 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 ST7LQ8TDW4 575 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 SLAMF6Q96DU3 332 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 C9orf16Q9BUW7 83 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 DDX28Q9NUL7 540 aaKnown RBP13.05□□□□□ -0.32
UBE3B-201ENST00000340074 SLCO1C1Q9NYB5 712 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 TEP1Q99973 2627 aaKnown RBP13.05□□□□□ -0.32
UBE3B-201ENST00000340074 ERICH4A6NGS2 130 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 H3BSA7 217 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 ACSM4P0C7M7 580 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 RAD23AP54725 363 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 TNK1Q13470 666 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 EIF2B1Q14232 305 aaKnown RBP13.05□□□□□ -0.32
UBE3B-201ENST00000340074 ZIK1Q3SY52 487 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-201ENST00000340074 ZBTB49Q6ZSB9 765 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 SPATC1Q76KD6 591 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 EME1Q96AY2 570 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 TEAD3Q99594 435 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 SLC29A1Q99808 456 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 CENPMQ9NSP4 180 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 GPR160Q9UJ42 338 aa13.05□□□□□ -0.32
UBE3B-201ENST00000340074 ZANQ9Y493 2812 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 CCDC182A6NF36 153 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 ZNF878C9JN71 531 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 J3QW42 95 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 M0R135 149 aa13.04□□□□□ -0.32
UBE3B-201ENST00000340074 ERCC1P07992 297 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 5.8 ms