RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SLC38A9Q8NBW4 561 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR51T1Q8NGJ9 327 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CRYGNQ8WXF5 182 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 GALMQ96C23 342 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FAAP24Q9BTP7 215 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NCOR1P1Q9H4R4 102 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PLEKHB1Q9UF11 243 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TBX21Q9UL17 535 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FANCMQ8IYD8 2048 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 E9PQ18 207 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CLDN1O95832 211 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CRYAAP02489 173 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NID1P14543 1247 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 GPR12P47775 334 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 IDH3AP50213 366 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NCBP2P52298 156 aaKnown RBP eCLIP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 IZUMO4Q1ZYL8 232 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SPRED3Q2MJR0 410 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SCGB2B2Q4G0G5 96 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 AGTRAPQ6RW13 159 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CDHR3Q6ZTQ4 885 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR5AS1Q8N127 324 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR14A16Q8NHC5 309 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 GIMAP1Q8WWP7 306 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MANBALQ9NQG1 85 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 DNMT3BQ9UBC3 853 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 KCNMB2Q9Y691 235 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MYADML2A6NDP7 307 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF850A8MQ14 1090 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MBPP02686 304 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CSRP1P21291 193 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PIGPP57054 158 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FAM3BP58499 235 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TAS2R39P59534 338 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FOXO1Q12778 655 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HES1Q14469 280 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF766Q5HY98 468 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ELFN2Q5R3F8 820 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MDGA2Q7Z553 956 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TFAP2CQ92754 450 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 EXTL1Q92935 676 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TMBIM1Q969X1 311 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 NOL4LQ96MY1 436 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 INTS14Q96SY0 518 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR5V1Q9UGF6 321 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PHF3Q92576 2039 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SLC5A10A0PJK1 596 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ANKRD30BLA7E2S9 258 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HIDE1A8MVS5 230 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SLC1A7O00341 560 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MSI1O43347 362 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 EIF4E2O60573 245 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MRPL33O75394 65 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HLA-AP01891 365 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TFAP2AP05549 437 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 LIMS3P0CW19 117 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 LIMS4P0CW20 117 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 UNGP13051 313 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ELOBQ15370 118 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FBXW12Q6X9E4 464 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 Q6ZTK2 550 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OVCH1Q7RTY7 1134 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 AMIGO2Q86SJ2 522 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 METTL27Q8N6F8 245 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CCDC120Q96HB5 630 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 DMRTB1Q96MA1 342 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 STACQ99469 402 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 S1PR3Q99500 378 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CDCA4Q9BXL8 241 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR51V1Q9H2C8 321 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 BET1LQ9NYM9 111 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ZDHHC8Q9ULC8 765 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MRPS28Q9Y2Q9 187 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1W2PN81 502 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SCG5P05408 212 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR5G3P0C626 314 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 LAMP1P11279 417 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SPNP16150 400 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ELAVL4P26378 380 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CHRNA7P36544 502 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SGSHP51688 502 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PLA2G16P53816 162 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 AQP4P55087 323 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SIGLECL1Q8N7X8 197 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR1S1Q8NH92 325 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 DPH3Q96FX2 82 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 APIPQ96GX9 242 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 RAB40CQ96S21 281 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 GDF15Q99988 308 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ABHD6Q9BV23 337 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 SEC11CQ9BY50 192 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 DCAF13Q9NV06 445 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 OR52A1Q9UKL2 312 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 CSNK1G3Q9Y6M4 447 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 MYBPHLA2RUH7 354 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TISP43B9A030 160 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 H0YIV9 168 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PPIHO43447 177 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TLX2O43763 284 aaPredicted RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 PRKRAO75569 313 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms