RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 RNF148Q8N7C7 305 aa16.39■□□□□ 0.21
ITGA4-202ENST00000339307 OR5L1Q8NGL2 311 aa16.39■□□□□ 0.21
ITGA4-202ENST00000339307 TSSK2Q96PF2 358 aa16.39■□□□□ 0.21
ITGA4-202ENST00000339307 PLA2G12AQ9BZM1 189 aa16.39■□□□□ 0.21
ITGA4-202ENST00000339307 SRA1Q9HD15 236 aaKnown RBP16.39■□□□□ 0.21
ITGA4-202ENST00000339307 MMP26Q9NRE1 261 aa16.39■□□□□ 0.21
ITGA4-202ENST00000339307 DDX28Q9NUL7 540 aaKnown RBP16.39■□□□□ 0.21
ITGA4-202ENST00000339307 SAMD4AQ9UPU9 718 aaKnown RBP16.39■□□□□ 0.21
ITGA4-202ENST00000339307 PPIAL4AQ9Y536 164 aa16.39■□□□□ 0.21
ITGA4-202ENST00000339307 TANC2Q9HCD6 1990 aa16.39■□□□□ 0.21
ITGA4-202ENST00000339307 IGHV3-64DA0A0J9YX35 117 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 PPP1R3DO95685 299 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 CDKN2AP42771 156 aaKnown RBP16.38■□□□□ 0.21
ITGA4-202ENST00000339307 OMPP47874 163 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 SEC61A1P61619 476 aaKnown RBP16.38■□□□□ 0.21
ITGA4-202ENST00000339307 ZMYND11Q15326 602 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 OR2T2Q6IF00 324 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 C8orf82Q6P1X6 216 aaPredicted RBP16.38■□□□□ 0.21
ITGA4-202ENST00000339307 DNM1P34Q6PK57 102 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 DPY19L2P2Q6ZN68 376 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 PTCHD4Q6ZW05 846 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 ADCK1Q86TW2 530 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 JAZF1Q86VZ6 243 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 ZNF283Q8N7M2 679 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 OR10AD1Q8NGE0 317 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 ERMAPQ96PL5 475 aaPredicted RBP16.38■□□□□ 0.21
ITGA4-202ENST00000339307 PATZ1Q9HBE1 687 aaKnown RBP16.38■□□□□ 0.21
ITGA4-202ENST00000339307 VSX1Q9NZR4 365 aaPredicted RBP16.38■□□□□ 0.21
ITGA4-202ENST00000339307 AUP1Q9Y679 476 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 NBEAL1Q6ZS30 2694 aa16.38■□□□□ 0.21
ITGA4-202ENST00000339307 OR6C6A6NF89 314 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 ZNF205O95201 554 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 RAC2P15153 192 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 RGS6P49758 472 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 SEC23BQ15437 767 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 TMEM155Q4W5P6 130 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 ESCO2Q56NI9 601 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 CORO6Q6QEF8 472 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 SMARCD3Q6STE5 483 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 LRRC28Q86X40 367 aaPredicted RBP16.37■□□□□ 0.21
ITGA4-202ENST00000339307 BHLHE23Q8NDY6 225 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 GJC3Q8NFK1 279 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 ZNF582Q96NG8 517 aaPredicted RBP16.37■□□□□ 0.21
ITGA4-202ENST00000339307 MRI1Q9BV20 369 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 WDR76Q9H967 626 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 SPAG4Q9NPE6 437 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 NDE1Q9NXR1 346 aa16.37■□□□□ 0.21
ITGA4-202ENST00000339307 TMEM89A2RUT3 159 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 CRABP1P29762 137 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 SLC6A9P48067 706 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 SPIBQ01892 262 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 SLC27A4Q6P1M0 643 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 LEG1Q6P5S2 330 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 TRPM8Q7Z2W7 1104 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 FAM86B1Q8N7N1 296 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 ZNF420Q8TAQ5 688 aaPredicted RBP16.36■□□□□ 0.21
ITGA4-202ENST00000339307 FANK1Q8TC84 345 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 APOBEC3DQ96AK3 386 aaPredicted RBP16.36■□□□□ 0.21
ITGA4-202ENST00000339307 GPX7Q96SL4 187 aaPredicted RBP16.36■□□□□ 0.21
ITGA4-202ENST00000339307 CDADC1Q9BWV3 514 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 NTN4Q9HB63 628 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 ESM1Q9NQ30 184 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 DCAF13Q9NV06 445 aaKnown RBP16.36■□□□□ 0.21
ITGA4-202ENST00000339307 OR5V1Q9UGF6 321 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 TRAPPC2LH3BP13 241 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 GADD45GO95257 159 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 CYB5R3P00387 301 aaPredicted RBP16.36■□□□□ 0.21
ITGA4-202ENST00000339307 RENP00797 406 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 HLA-DQA2P01906 255 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 NOS3P29474 1203 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 MDH2P40926 338 aaKnown RBP16.36■□□□□ 0.21
ITGA4-202ENST00000339307 ZNF154Q13106 437 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 SIGLECL1Q8N7X8 197 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 OR8G5Q8NG78 346 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 OR13G1Q8NGZ3 307 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 POP5Q969H6 163 aaKnown RBP16.36■□□□□ 0.21
ITGA4-202ENST00000339307 NSL1Q96IY1 281 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 IFT27Q9BW83 186 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 GCM1Q9NP62 436 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 ABCD2Q9UBJ2 740 aa16.36■□□□□ 0.21
ITGA4-202ENST00000339307 ANK2Q01484 3957 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 PPIAL4EA0A075B759 164 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 PPIAL4CA0A0B4J2A2 164 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 PPIAL4DF5H284 164 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 H0YL77 283 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 TMEM178BH3BS89 294 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 PPIAL4FP0DN26 164 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 CALB2P22676 271 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 SRP9P49458 86 aaKnown RBP16.35■□□□□ 0.21
ITGA4-202ENST00000339307 MMP16P51512 607 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 SMIM11AP58511 58 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 FXYD6P3P58550 94 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 UBA52P62987 128 aaKnown RBP16.35■□□□□ 0.21
ITGA4-202ENST00000339307 DBPQ10586 325 aaPredicted RBP16.35■□□□□ 0.21
ITGA4-202ENST00000339307 PGM2L1Q6PCE3 622 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 LINC00346Q8IVM7 164 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 MUC20Q8N307 709 aaPredicted RBP16.35■□□□□ 0.21
ITGA4-202ENST00000339307 ZDHHC22Q8N966 263 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 DEFB108BQ8NET1 73 aa16.35■□□□□ 0.21
ITGA4-202ENST00000339307 OR2AJ1Q8NGZ0 328 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms