RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PNPLA2Q96AD5 504 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 PBOV1Q9GZY1 135 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 DEFB127Q9H1M4 99 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 CRLF2Q9HC73 371 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 DDX28Q9NUL7 540 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 LIPGQ9Y5X9 500 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 FRYQ5TBA9 3013 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 APOA1P02647 267 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 ENDOGQ14249 297 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 RNFT1Q5M7Z0 435 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 TAS2R4Q9NYW5 299 aa19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 PCDHGA9Q9Y5G4 932 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-203ENST00000339162 RTTNQ86VV8 2226 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 ACSM4P0C7M7 580 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 ZNF133P52736 654 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 SOX8P57073 446 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 SERPINA12Q8IW75 414 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 PLPP7Q8NBV4 271 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 C11orf54Q9H0W9 315 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 OR5V1Q9UGF6 321 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 SLC5A6Q9Y289 635 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 LINC01387J3KSC0 135 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 PLA2G10O15496 165 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 CYTIPO60759 359 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 ZNF708P17019 499 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 RIN1Q13671 783 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 RNASE12Q5GAN4 147 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 PDSS1Q5T2R2 415 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 IGF2-ASQ6U949 168 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 ZNF704Q6ZNC4 412 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 LINGO2Q7L985 606 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 CMTM4Q8IZR5 234 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 CADM3Q8N126 398 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 CELF2-AS1Q8N7Q2 184 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 ZFP62Q8NB50 900 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 WACQ9BTA9 647 aa19.78■□□□□ 0.76
PDLIM2-203ENST00000339162 LANCL1O43813 399 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 IGHV3-9P01782 118 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 ISG15P05161 165 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 CD2P06729 351 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 PTBP1P26599 531 aaKnown RBP eCLIP19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 LSM6P62312 80 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 PMP22Q01453 160 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 CAMK2BQ13554 666 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 CARTPTQ16568 116 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 LUZP2Q86TE4 346 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 C19orf18Q8NEA5 215 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 OR51A2Q8NGJ7 313 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 SETD6Q8TBK2 473 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 INTS12Q96CB8 462 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 ZFP3Q96NJ6 502 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 KCNJ15Q99712 375 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 SPTBN2O15020 2390 aa19.77■□□□□ 0.76
PDLIM2-203ENST00000339162 BOLA2-SMG1P6H3BVE0 249 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 ACHEP22303 614 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 ZNF84P51523 738 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 ZNF121P58317 390 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 CLN3Q13286 438 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 TMEM244Q5VVB8 128 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 ELMOD2Q8IZ81 293 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 SLC7A6Q92536 515 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 SLC25A38Q96DW6 304 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 ZNF319Q9P2F9 582 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 RCE1Q9Y256 329 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 UBCP0CG48 685 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 DCTDP32321 178 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 TNFSF10P50591 281 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 PSMA6P60900 246 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 PLA2G7Q13093 441 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 SLC10A1Q14973 349 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 DEFB109BQ30KR1 87 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 UBE2NLQ5JXB2 153 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 NAA40Q86UY6 237 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 FNDC9Q8TBE3 224 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 OR51E1Q8TCB6 317 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 SOX7Q9BT81 388 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 HDHD2Q9H0R4 259 aa19.76■□□□□ 0.75
PDLIM2-203ENST00000339162 CX3CR1P49238 355 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 ASAH1Q13510 395 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 MTFR2Q6P444 385 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 FOXL2NBQ6ZUU3 175 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 GPR137CQ8N3F9 429 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 FBXO17Q96EF6 278 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 SCMH1Q96GD3 660 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 IRF2BPLQ9H1B7 796 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 DCHS1Q96JQ0 3298 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 EEF1E1O43324 174 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 ITGA5P08648 1049 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 GFOD2Q3B7J2 385 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 PRSS45Q7RTY3 260 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 MEIOBQ8N635 442 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 ZNF283Q8N7M2 679 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 ZBTB8BQ8NAP8 495 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 THRSPQ92748 146 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 FGGYQ96C11 551 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 KCNK15Q9H427 330 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 CKLFQ9UBR5 152 aa19.75■□□□□ 0.75
PDLIM2-203ENST00000339162 C5orf63A6NC05 138 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 F5H5K5 113 aa19.74■□□□□ 0.75
PDLIM2-203ENST00000339162 SYT7O43581 403 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms