RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 GMPPAQ96IJ6 420 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CABLES2Q9BTV7 478 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CST11Q9H112 138 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 P2RY12Q9H244 342 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 OR51I1Q9H343 314 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 A4GALTQ9NPC4 353 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 AURKAIP1Q9NWT8 199 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 LRP12Q9Y561 859 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 A0A1W2PNV4 684 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TISP43B9A030 160 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 EEF1E1-BLOC1S5C9J1V9 151 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 M0R3H8 397 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 HBP1O60381 514 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CNMDO75829 334 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 GLSO94925 669 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PNLIPP16233 465 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF19P17023 458 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 OPRD1P41143 372 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PTH2RP49190 550 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ARF3P61204 181 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 RPL24P83731 157 aaKnown RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 ARF1P84077 181 aaKnown RBP3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PRRT3Q5FWE3 981 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SDHAF4Q5VUM1 108 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 KIRREL2Q6UWL6 708 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 HASPINQ8TF76 798 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 CASTOR1Q8WTX7 329 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 RLN3Q8WXF3 142 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SLC25A51Q9H1U9 297 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TNFRSF12AQ9NP84 129 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 PXMP2Q9NR77 195 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SLC45A2Q9UMX9 530 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 SH2B3Q9UQQ2 575 aa3.77□□□□□ -1.81
NEDD4-201ENST00000338963 TRAV14DV4A0A0A6YYC5 116 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PIGBOS1A0A0B4J2F0 54 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 YDJCA8MPS7 323 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 H3BQ15 152 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 WISP3O95389 354 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SNAI1O95863 264 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ITGB2P05107 769 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GOT1P17174 413 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GUCA1AP43080 201 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PPICP45877 212 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CDKN1CP49918 316 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MANFP55145 182 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MTCP1P56278 107 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CAV3P56539 151 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TAS2R50P59544 299 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ELOBQ15370 118 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 HIST3H3Q16695 136 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MST1LQ2TV78 715 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SLC25A52Q3SY17 297 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PAQR3Q6TCH7 311 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 UNQ6494/PRO21346Q6UXR6 183 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 FA2HQ7L5A8 372 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GDF7Q7Z4P5 450 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CMTM4Q8IZR5 234 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR6T1Q8NGN1 323 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GPR148Q8TDV2 347 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM40Q8WWA1 233 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GUCD1Q96NT3 240 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GINS3Q9BRX5 216 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 Q9N2J8 555 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR5B21A6NL26 309 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR11H12B2RN74 326 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 RNASET2O00584 256 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SLC16A5O15375 505 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 HLA-AP01891 365 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 HLA-HP01893 362 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR12D1P0DN82 309 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 STC1P52823 247 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PMCHL1Q16048 86 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF506Q5JVG8 444 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MRPL54Q6P161 138 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 TEX43Q6ZNM6 134 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MOB1BQ7L9L4 216 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 MRGPREQ86SM8 312 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR11H1Q8NG94 326 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR11H2Q8NH07 326 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ANAPC16Q96DE5 110 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 EAF1Q96JC9 268 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 AUNIPQ9H7T9 357 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 RPF1Q9H9Y2 349 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 OR2S2Q9NQN1 319 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 PADI3Q9ULW8 664 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 LOC100509620A0A075B734 347 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 EDIL3O43854 480 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GPANK1O95872 356 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 GASTP01350 101 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ARG1P05089 322 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 HOXC6P09630 235 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ATXN8OSP0DMR3 200 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 SNRPBP14678 240 aaKnown RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 JAG1P78504 1218 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 CACNG1Q06432 222 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 DCST2Q5T1A1 773 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 FAM162BQ5T6X4 162 aa3.76□□□□□ -1.81
NEDD4-201ENST00000338963 ZNF770Q6IQ21 691 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-201ENST00000338963 RPUSD3Q6P087 351 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms