RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 RGS6P49758 472 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 HCCSP53701 268 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 SELENOVP59797 346 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 ISL1P61371 349 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 GRB2P62993 217 aaKnown RBP10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 SNTB2Q13425 540 aaKnown RBP10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 SNCBQ16143 134 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 KLHL22Q53GT1 634 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 C6orf52Q5T4I8 152 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 AGAP6Q5VW22 663 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 KRT80Q6KB66 452 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 VHLLQ6RSH7 139 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 IZUMO2Q6UXV1 221 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 THAP5Q7Z6K1 395 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 KRT77Q7Z794 578 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 SLC35F2Q8IXU6 374 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 PAQR4Q8N4S7 273 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 OR5L1Q8NGL2 311 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 OR2T27Q8NH04 317 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 ST7LQ8TDW4 575 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 SMAP2Q8WU79 429 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 RNF133Q8WVZ7 376 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 RNFT2Q96EX2 444 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 MYCBPQ99417 103 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 KCNJ15Q99712 375 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 COPS4Q9BT78 406 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF442Q9H7R0 627 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 SP140LQ9H930 580 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 ADGRL4Q9HBW9 690 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 TUBG2Q9NRH3 451 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 CA10Q9NS85 328 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 TBCCD1Q9NVR7 557 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 AASSQ9UDR5 926 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 CMAHPQ9Y471 501 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 BAHCC1Q9P281 2608 aa10.29□□□□□ -0.76
SPTLC1-202ENST00000337841 A0A1W2PPR1 153 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 ZNF254O75437 659 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 FAM157BP0CG42 384 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 BMP4P12644 408 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 HSD11B1P28845 292 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 TTKP33981 857 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 SERPINF1P36955 418 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 KRTAP10-9P60411 292 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 NKX6-1P78426 367 aaPredicted RBP10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 CDK5R2Q13319 367 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 MOGQ16653 247 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 RGS7BPQ6MZT1 257 aaPredicted RBP10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 DEGS2Q6QHC5 323 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 SPATC1Q76KD6 591 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 OR10S1Q8NGN2 331 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 OR1J1Q8NGS3 322 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 SLC7A6Q92536 515 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 MROQ9BYG7 248 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 NIPAL2Q9H841 368 aa10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 PNRC2Q9NPJ4 139 aaKnown RBP10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 DDX28Q9NUL7 540 aaKnown RBP10.28□□□□□ -0.76
SPTLC1-202ENST00000337841 IRGMA1A4Y4 181 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 J3QW42 95 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 M0R135 149 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ICMTO60725 284 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 WBP4O75554 376 aaKnown RBP10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 FADS2O95864 444 aaKnown RBP10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 LCATP04180 440 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 DBHP09172 617 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 GNAO1P09471 354 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 OR4A8P0C604 315 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ACSM4P0C7M7 580 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 PSKH1P11801 424 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 DNASE1P24855 282 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 GCH1P30793 250 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 WNT5AP41221 380 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 SLC6A9P48067 706 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 PRKXP51817 358 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 PPP1CBP62140 327 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 CSNK2BP67870 215 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ACTC1P68032 377 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ACTA1P68133 377 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 RSPO1Q2MKA7 263 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF718Q3SXZ3 478 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 DRAM2Q6UX65 266 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 USP51Q70EK9 711 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 MUC15Q8N387 334 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF283Q8N7M2 679 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 OR10H4Q8NGA5 316 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ABHD4Q8TB40 342 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 TMEM171Q8WVE6 324 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 PIGTQ969N2 578 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 APOBEC3DQ96AK3 386 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 MRPL48Q96GC5 212 aaKnown RBP10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF799Q96GE5 643 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 LURAP1Q96LR2 239 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 OR51B6Q9H340 312 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 Q9H521 79 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 AMBNQ9NP70 447 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 MRPS18AQ9NVS2 196 aaKnown RBP10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 GPR160Q9UJ42 338 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 IKZF2Q9UKS7 526 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 RAB26Q9ULW5 256 aa10.27□□□□□ -0.77
SPTLC1-202ENST00000337841 EXOGQ9Y2C4 368 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms