RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 LRRC28Q86X40 367 aaPredicted RBP9□□□□□ -0.97
CAPN3-202ENST00000337571 ZNF283Q8N7M2 679 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 OR13G1Q8NGZ3 307 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 SLC7A13Q8TCU3 470 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 C22orf15Q8WYQ4 148 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 POP5Q969H6 163 aaKnown RBP9□□□□□ -0.97
CAPN3-202ENST00000337571 RASD2Q96D21 266 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 RSRC1Q96IZ7 334 aaKnown RBP9□□□□□ -0.97
CAPN3-202ENST00000337571 ZNF582Q96NG8 517 aaPredicted RBP9□□□□□ -0.97
CAPN3-202ENST00000337571 OR2V2Q96R30 315 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 GPA33Q99795 319 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 SLC6A7Q99884 636 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 CDADC1Q9BWV3 514 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 NUAK2Q9H093 628 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 CCDC134Q9H6E4 229 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 PATZ1Q9HBE1 687 aaKnown RBP9□□□□□ -0.97
CAPN3-202ENST00000337571 NRIP3Q9NQ35 241 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 ADA2Q9NZK5 511 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 IL20RAQ9UHF4 553 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 SAMD4AQ9UPU9 718 aaKnown RBP9□□□□□ -0.97
CAPN3-202ENST00000337571 AUP1Q9Y679 476 aa9□□□□□ -0.97
CAPN3-202ENST00000337571 UNC119BA6NIH7 251 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 LRRC30A6NM36 301 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 RENP00797 406 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 IGHV2-70P01814 119 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 ZFP36P26651 326 aaKnown RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 MDH1P40925 334 aaKnown RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 MDH2P40926 338 aaKnown RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SLC6A9P48067 706 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SRP9P49458 86 aaKnown RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 COMPP49747 757 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 PSME3P61289 254 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 ESCO2Q56NI9 601 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SPRNQ5BIV9 151 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SMARCD3Q6STE5 483 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 OR5AS1Q8N127 324 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 MUC20Q8N307 709 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 OR52J3Q8NH60 311 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 ITLN1Q8WWA0 313 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SLC7A6Q92536 515 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 APOBEC3DQ96AK3 386 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 ERMAPQ96PL5 475 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 HCAR1Q9BXC0 346 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 PLA2G12AQ9BZM1 189 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 POFUT1Q9H488 388 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SRA1Q9HD15 236 aaKnown RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 PTTG3PQ9NZH4 202 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 VSX1Q9NZR4 365 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-202ENST00000337571 NDUFAF4Q9P032 175 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 OR5V1Q9UGF6 321 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 OPN4Q9UHM6 478 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 NUP50Q9UKX7 468 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 SIGLEC7Q9Y286 467 aa8.99□□□□□ -0.97
CAPN3-202ENST00000337571 TENM1Q9UKZ4 2725 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 RER1O15258 196 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 IRF2P14316 349 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 SELEP16581 610 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 ZNF26P17031 533 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-202ENST00000337571 CPT2P23786 658 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 NOS3P29474 1203 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 IFNGR2P38484 337 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 CDKN2AP42771 156 aaKnown RBP8.98□□□□□ -0.97
CAPN3-202ENST00000337571 OMPP47874 163 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 ZNF154Q13106 437 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 HLXQ14774 488 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-202ENST00000337571 KCNMB1Q16558 191 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 SLC36A3Q495N2 470 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 CCDC92Q53HC0 331 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-202ENST00000337571 OTPQ5XKR4 325 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 C8orf82Q6P1X6 216 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-202ENST00000337571 Q6ZR03 302 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 JAZF1Q86VZ6 243 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 OR8G5Q8NG78 346 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 OR2AJ1Q8NGZ0 328 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 SGMS2Q8NHU3 365 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 MCUR1Q96AQ8 359 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 PLEKHA8Q96JA3 519 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 GPX7Q96SL4 187 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-202ENST00000337571 HDHD2Q9H0R4 259 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 GCM1Q9NP62 436 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 MMP26Q9NRE1 261 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 DCAF13Q9NV06 445 aaKnown RBP8.98□□□□□ -0.97
CAPN3-202ENST00000337571 TMEM100Q9NV29 134 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 ATPIF1Q9UII2 106 aa8.98□□□□□ -0.97
CAPN3-202ENST00000337571 TRAPPC2LH3BP13 241 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 TMEM178BH3BS89 294 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 IMPA2O14732 288 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 GADD45GO95257 159 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 PPP1R3DO95685 299 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 HLA-DQA2P01906 255 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 DBHP09172 617 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 SLC6A6P31641 620 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 GNB2P62879 340 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 FOXL1Q12952 345 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 ECH1Q13011 328 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 MALLQ13021 153 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 ZMYND11Q15326 602 aa8.97□□□□□ -0.97
CAPN3-202ENST00000337571 RFX4Q33E94 735 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms