RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 LINC00303Q3SY05 128 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 LANCL3Q6ZV70 420 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 TMPRSS11FQ6ZWK6 438 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 BHLHE23Q8NDY6 225 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 C14orf79Q96F83 325 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 EXO1Q9UQ84 846 aaKnown RBP12.49□□□□□ -0.41
RTN4-202ENST00000337526 SLC17A4Q9Y2C5 497 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 PCM1Q15154 2024 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
RTN4-202ENST00000337526 SNRPNP63162 240 aaKnown RBP12.49□□□□□ -0.41
RTN4-202ENST00000337526 LINC00696Q6ZRV3 163 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 TERB2Q8NHR7 220 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 WDR89Q96FK6 387 aaPredicted RBP12.49□□□□□ -0.41
RTN4-202ENST00000337526 SLC25A32Q9H2D1 315 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 MOB1AQ9H8S9 216 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 GPR173Q9NS66 373 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 SLCO1C1Q9NYB5 712 aa12.49□□□□□ -0.41
RTN4-202ENST00000337526 PLRG1O43660 514 aaKnown RBP12.48□□□□□ -0.41
RTN4-202ENST00000337526 TUSC2O75896 110 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 ATF1P18846 271 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
RTN4-202ENST00000337526 DEFA6Q01524 100 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 THEM4Q5T1C6 240 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 ZBTB37Q5TC79 503 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 BRICD5Q6PL45 260 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 AMER3Q8N944 861 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 OR4N2Q8NGD1 307 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 ZNF2Q9BSG1 426 aaPredicted RBP12.48□□□□□ -0.41
RTN4-202ENST00000337526 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 KPTNQ9Y664 436 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 NRG2O14511 850 aaPredicted RBP12.48□□□□□ -0.41
RTN4-202ENST00000337526 TBX19O60806 448 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 IGHA2P01877 340 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 OR13C7P0DN81 318 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 ABOP16442 354 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 GPNMBQ14956 572 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 TOR2AQ5JU69 321 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 DPPA2Q7Z7J5 298 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 BAP18Q8IXM2 172 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 OR2G3Q8NGZ4 309 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 ST8SIA1Q92185 356 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 APC2O95996 2303 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 KIR2DS1A0A191URI9 304 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 XRCC3O43542 346 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 TCN2P20062 427 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 LAP3P28838 519 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 KIR2DS4P43632 304 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 CAPZBP47756 277 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 KIR2DS1Q14954 304 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 CDH26Q8IXH8 852 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 MVB12AQ96EY5 273 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 C20orf24Q9BUV8 137 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 ERVMER34-1Q9H9K5 563 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 SLC22A11Q9NSA0 550 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 SIT1Q9Y3P8 196 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 R4GMQ9 66 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 SCO1O75880 301 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 DFFBO76075 338 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 OPRM1P35372 400 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 CYB561P49447 251 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 OR52B4Q8NGK2 314 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 MARCH1Q8TCQ1 289 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 B9D1Q9UPM9 204 aa12.48□□□□□ -0.41
RTN4-202ENST00000337526 EDN3P14138 238 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 HRH1P35367 487 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 CD300CQ08708 224 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 IL10RAQ13651 578 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 INSL4Q14641 139 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 TEX261Q6UWH6 196 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 BATF2Q8N1L9 274 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 OR52H1Q8NGJ2 320 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 OR51H1Q8NH63 302 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 BORCS7Q96B45 105 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 MUCL1Q96DR8 90 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 GFOD1Q9NXC2 390 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 FLVCR1Q9Y5Y0 555 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 URGCP-MRPS24S4R325 110 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 U3KQ87 197 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 A0A087WUJ7 227 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 M0R135 149 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 TAAR5O14804 337 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 EFSO43281 561 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 ZNF354AO60765 605 aaPredicted RBP12.47□□□□□ -0.41
RTN4-202ENST00000337526 TMEM127O75204 238 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 NXPH3O95157 252 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 AADACP22760 399 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 EXT1Q16394 746 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 SLC38A9Q8NBW4 561 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 LFNGQ8NES3 379 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 OR51A2Q8NGJ7 313 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 PPP1R1CQ8WVI7 109 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 ZNF799Q96GE5 643 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
RTN4-202ENST00000337526 DSCR3O14972 297 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 RGS11O94810 467 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 TPOP07202 933 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 GFERP55789 205 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms