RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 DEGS2Q6QHC5 323 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 ZNF611Q8N823 705 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 RNFT2Q96EX2 444 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 C4orf45Q96LM5 186 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 COG8Q96MW5 612 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 KCNJ15Q99712 375 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 NIPAL2Q9H841 368 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 CENPMQ9NSP4 180 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 MRPS18AQ9NVS2 196 aaKnown RBP13.29□□□□□ -0.28
SEC13-201ENST00000337354 RAB26Q9ULW5 256 aa13.29□□□□□ -0.28
SEC13-201ENST00000337354 ABCA12Q86UK0 2595 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 A0A1W2PPR1 153 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 E7EQL1 145 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 WBP4O75554 376 aaKnown RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 GNAO1P09471 354 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 DBTP11182 482 aaKnown RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 PSKH1P11801 424 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 APOBEC3AP31941 199 aaPredicted RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 TPTEP56180 551 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 RPS23P62266 143 aaKnown RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 GRB2P62993 217 aaKnown RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 CSNK2BP67870 215 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 RAB40BQ12829 278 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 CDK5R2Q13319 367 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 RSPO1Q2MKA7 263 aaPredicted RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 KLHL22Q53GT1 634 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 SLC35F2Q8IXU6 374 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 PAQR4Q8N4S7 273 aaPredicted RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 OR10S1Q8NGN2 331 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 FBLIM1Q8WUP2 373 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 FBXW5Q969U6 566 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 ZNF184Q99676 751 aaPredicted RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 DHRS9Q9BPW9 319 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 COPS4Q9BT78 406 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 ANKRD60Q9BZ19 345 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 CA10Q9NS85 328 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 FAIMQ9NVQ4 179 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 AASSQ9UDR5 926 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 EXOGQ9Y2C4 368 aaKnown RBP13.28□□□□□ -0.28
SEC13-201ENST00000337354 ITPR2Q14571 2701 aa13.28□□□□□ -0.28
SEC13-201ENST00000337354 IRGMA1A4Y4 181 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 ZNF670-ZNF695F2Z2N8 137 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 F5H5K5 113 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 ZNF254O75437 659 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 FADS2O95864 444 aaKnown RBP13.27□□□□□ -0.29
SEC13-201ENST00000337354 ABHD16AO95870 558 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
SEC13-201ENST00000337354 DCTDP32321 178 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 OPRL1P41146 370 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 HCCSP53701 268 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 ACTC1P68032 377 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 ACTA1P68133 377 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 ROM1Q03395 351 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 ZNF91Q05481 1191 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 EGR3Q06889 387 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 SNTB2Q13425 540 aaKnown RBP13.27□□□□□ -0.29
SEC13-201ENST00000337354 KRT80Q6KB66 452 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 C20orf204Q6ZNR8 217 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 EGFL6Q8IUX8 553 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 LURAP1Q96LR2 239 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 MROQ9BYG7 248 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 SP140LQ9H930 580 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 GRIP1Q9Y3R0 1128 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 NOTCH2Q04721 2471 aa13.27□□□□□ -0.29
SEC13-201ENST00000337354 J3QRE1 110 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 DBHP09172 617 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 H2BFMP0C1H6 154 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 MYF6P23409 242 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 HSD11B1P28845 292 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 WNT5AP41221 380 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 CXCR4P61073 352 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 ZNF322Q6U7Q0 402 aaPredicted RBP13.26□□□□□ -0.29
SEC13-201ENST00000337354 DRAM2Q6UX65 266 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 COLCA1Q6ZS62 124 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 KRT77Q7Z794 578 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 ZNF679Q8IYX0 411 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 OR5L1Q8NGL2 311 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 CNIH3Q8TBE1 160 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 SMAP2Q8WU79 429 aaPredicted RBP13.26□□□□□ -0.29
SEC13-201ENST00000337354 SLC7A6Q92536 515 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 NEUROG1Q92886 237 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 APOBEC3DQ96AK3 386 aaPredicted RBP13.26□□□□□ -0.29
SEC13-201ENST00000337354 LGALS12Q96DT0 336 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 AMELYQ99218 206 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 Q9H521 79 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 AMBNQ9NP70 447 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 PLCXD1Q9NUJ7 323 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 CMAHPQ9Y471 501 aa13.26□□□□□ -0.29
SEC13-201ENST00000337354 FBN2P35556 2912 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 M0R135 149 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 SMPD2O60906 423 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 ACSM4P0C7M7 580 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 FAM157BP0CG42 384 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 TTKP33981 857 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 THBS4P35443 961 aa13.25□□□□□ -0.29
SEC13-201ENST00000337354 SERPINF1P36955 418 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms