RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZNF16P17020 682 aaPredicted RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 ZNF616Q08AN1 781 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 RASGEF1BQ0VAM2 473 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 CCINQ13939 588 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 PLXDC2Q6UX71 529 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 GSG1LQ6UXU4 331 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 MEX3BQ6ZN04 569 aaKnown RBP7.41□□□□□ -1.22
HPS4-201ENST00000336873 TMEM200AQ86VY9 491 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 ZBTB44Q8NCP5 570 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 OR1J4Q8NGS1 313 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 CCDC74AQ96AQ1 378 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 SLC46A1Q96NT5 459 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 TMPRSS13Q9BYE2 586 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 ZNF160Q9HCG1 818 aa7.41□□□□□ -1.22
HPS4-201ENST00000336873 THSD7BQ9C0I4 1608 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 TRAV36DV7A0A075B6V5 113 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 GGT3PA6NGU5 568 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 TMEM212A6NML5 194 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 DBHP09172 617 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 ADRA2CP18825 462 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 BCKDHBP21953 392 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 S100A11P31949 105 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 HRH1P35367 487 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 AKR1C3P42330 323 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 PPICP45877 212 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 MMP15P51511 669 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 GAS1P54826 345 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 FOXF1Q12946 379 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 NKAIN1Q4KMZ8 207 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 DCAF12L2Q5VW00 463 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 CD276Q5ZPR3 534 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 C19orf48Q6RUI8 117 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 FIP1L1Q6UN15 594 aaKnown RBP7.4□□□□□ -1.22
HPS4-201ENST00000336873 SEZ6L2Q6UXD5 910 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 C9orf62Q8N4C0 152 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 PNLDC1Q8NA58 520 aaKnown RBP7.4□□□□□ -1.22
HPS4-201ENST00000336873 PTPMT1Q8WUK0 201 aaPredicted RBP7.4□□□□□ -1.22
HPS4-201ENST00000336873 ST8SIA4Q92187 359 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 USB1Q9BQ65 265 aaKnown RBP7.4□□□□□ -1.22
HPS4-201ENST00000336873 PCDHB16Q9NRJ7 776 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 ST6GALNAC2Q9UJ37 374 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 DKKL1Q9UK85 242 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 OR2T1O43869 369 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 RBMXL2O75526 392 aaKnown RBP7.4□□□□□ -1.22
HPS4-201ENST00000336873 HLA-DQB1P01920 261 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 RAB40ALP0C0E4 278 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 OMGP23515 440 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 ZNF93P35789 620 aaPredicted RBP7.4□□□□□ -1.22
HPS4-201ENST00000336873 GPR3P46089 330 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 ACTBP60709 375 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 ACTG1P63261 375 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 CHRFAM7AQ494W8 412 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 PLA1AQ53H76 456 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 GLIPR1L1Q6UWM5 242 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 ZNF600Q6ZNG1 722 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 ZNF440Q8IYI8 595 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 TCTE3Q8IZS6 198 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 OR10G3Q8NGC4 313 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 UBALD1Q8TB05 177 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 MARCH1Q8TCQ1 289 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 GPBAR1Q8TDU6 330 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 RAB40AQ8WXH6 277 aa7.4□□□□□ -1.22
HPS4-201ENST00000336873 CXorf51AA0A1B0GTR3 108 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 A8MVM7 634 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 CRABP1P29762 137 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 ASCL1P50553 236 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 B2MP61769 119 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 RPS4XP62701 263 aaKnown RBP7.4□□□□□ -1.23
HPS4-201ENST00000336873 STPG1Q5TH74 334 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 YRDCQ86U90 279 aaKnown RBP7.4□□□□□ -1.23
HPS4-201ENST00000336873 ZNF679Q8IYX0 411 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 GALNT16Q8N428 558 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 SUMF1Q8NBK3 374 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 OR52N4Q8NGI2 321 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 ZNF75AQ96N20 296 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 C12orf57Q99622 126 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 SLC22A11Q9NSA0 550 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 FOXJ3Q9UPW0 622 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 FRYQ5TBA9 3013 aa7.4□□□□□ -1.23
HPS4-201ENST00000336873 LOC101059948A0A1B0GTJ6 334 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 RGS13O14921 159 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ERCC1P07992 297 aaPredicted RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 CELA2AP08217 269 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 BLVRBP30043 206 aaPredicted RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 SLC17A1Q14916 467 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 MOGAT2Q3SYC2 334 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ABCA11PQ4W5N1 156 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ZNF585AQ6P3V2 769 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OVCH1Q7RTY7 1134 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 GABRG1Q8N1C3 465 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SLC26A10Q8NG04 563 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OR11G2Q8NGC1 345 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 OR14L1PQ8NHC6 308 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 RBPMSQ93062 196 aaKnown RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 LIN37Q96GY3 246 aaPredicted RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 GABRG3Q99928 467 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 VRK1Q99986 396 aaPredicted RBP7.39□□□□□ -1.23
HPS4-201ENST00000336873 SOX7Q9BT81 388 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 ISYNA1Q9NPH2 558 aa7.39□□□□□ -1.23
HPS4-201ENST00000336873 SDHAF2Q9NX18 166 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms