RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 WRBO00258 174 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 IL33O95760 270 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 HLA-DQA2P01906 255 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 CD14P08571 375 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 SRMP19623 302 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 SDHAP31040 664 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 PPICP45877 212 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 FAM69BQ5VUD6 431 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 SLC36A1Q7Z2H8 476 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 MISPQ8IVT2 679 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 SLC35F3Q8IY50 421 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 ARMC10Q8N2F6 343 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 OR4C16Q8NGL9 310 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 OR4A4PQ8NGN8 299 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 PPP1R14AQ96A00 147 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 NMNAT2Q9BZQ4 307 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 GAREM1Q9H706 876 aa12.48□□□□□ -0.41
SF1-202ENST00000334944 PRPS1P60891 318 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 HNRNPKP61978 463 aaKnown RBP eCLIP12.47□□□□□ -0.418e-8■■■□□ 17.5
SF1-202ENST00000334944 ELAVL1Q15717 326 aaKnown RBP12.47□□□□□ -0.41
SF1-202ENST00000334944 KRBOX4Q5JUW0 171 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 HLA-DQA1Q5Y7H0 255 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 GLT8D1Q68CQ7 371 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 RPL22L1Q6P5R6 122 aaKnown RBP12.47□□□□□ -0.41
SF1-202ENST00000334944 TGIF2Q9GZN2 237 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 LAT2Q9GZY6 243 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 ANKRD10Q9NXR5 420 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 ABRACLQ9P1F3 81 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 NPFFR2Q9Y5X5 522 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 IGHV1OR21-1A0A087WYE8 117 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 OR2AT4A6NND4 320 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 H0YIG0 161 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 ARPC3O15145 178 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 GLCEO94923 617 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 AP3S2P59780 193 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 PLCXD2Q0VAA5 305 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 UBE2NLQ5JXB2 153 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 ELFN2Q5R3F8 820 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 UNQ6494/PRO21346Q6UXR6 183 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 SSX9Q7RTT3 188 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
SF1-202ENST00000334944 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 RBM14Q96PK6 669 aaKnown RBP12.47□□□□□ -0.41
SF1-202ENST00000334944 PHF7Q9BWX1 381 aaPredicted RBP12.47□□□□□ -0.41
SF1-202ENST00000334944 TBL1XR1Q9BZK7 514 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
SF1-202ENST00000334944 MRM2Q9UI43 246 aaKnown RBP12.47□□□□□ -0.41
SF1-202ENST00000334944 hCG_1809904A0A1W2PP81 198 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 A0A1W2PR64 198 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 A0A1W2PRV1 198 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 CXorf65A6NEN9 183 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 A6NLC8 198 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 RFPL4AA6NLU0 287 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 RFPL4AL1F8VTS6 287 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 UBE2CO00762 179 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 MAS1P04201 325 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 FBXO45P0C2W1 286 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 PI4KAP42356 2102 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 F2RL1P55085 397 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 HSD11B2P80365 405 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 DMWDQ09019 674 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 SLC25A45Q8N413 288 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 CNTNAP3BQ96NU0 1288 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 EXO5Q9H790 373 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 SEBOXQ9HB31 216 aaPredicted RBP12.46□□□□□ -0.41
SF1-202ENST00000334944 TMEM82A0PJX8 343 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 ARL6IP5O75915 188 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 PIAS2O75928 621 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 IGKV3-11P04433 115 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 IL5P05113 134 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 ASAH2BP0C7U1 165 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 CXCR1P25024 350 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 DLSTP36957 453 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 NXPH1P58417 271 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 EBPQ15125 230 aaKnown RBP12.46□□□□□ -0.41
SF1-202ENST00000334944 MEP1BQ16820 701 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 SYS1Q8N2H4 156 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 TMED6Q8WW62 240 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 SLC46A1Q96NT5 459 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 FRRS1LQ9P0K9 344 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 HIF3AQ9Y2N7 669 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 SDK2Q58EX2 2172 aa12.46□□□□□ -0.41
SF1-202ENST00000334944 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 ZNF729A6NN14 1252 aaPredicted RBP12.46□□□□□ -0.42
SF1-202ENST00000334944 OR8U8P0C7N1 319 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 PNMTP11086 282 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 ABOP16442 354 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 FBLP22087 321 aaKnown RBP12.46□□□□□ -0.42
SF1-202ENST00000334944 CPT2P23786 658 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 GGTLC2Q14390 218 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 TRAM1Q15629 374 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 GTPBP8Q8N3Z3 284 aaPredicted RBP12.46□□□□□ -0.42
SF1-202ENST00000334944 LRRC75AQ8NAA5 344 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 GPR119Q8TDV5 335 aa12.46□□□□□ -0.42
SF1-202ENST00000334944 C20orf24Q9BUV8 137 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms