RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 TMEM80Q96HE8 168 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 OR8B4Q96RC9 309 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 ATF6BQ99941 703 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 CENPMQ9NSP4 180 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 ERVK13-1Q9NX77 482 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 FBXL3Q9UKT7 428 aa15.16■□□□□ 0.02
CHGA-202ENST00000334654 IGHV2OR16-5A0A0B4J2B6 119 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.15■□□□□ 0.02
CHGA-202ENST00000334654 ZNF878C9JN71 531 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 PSMD9O00233 223 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 PTAFRP25105 342 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 HTR5AP47898 357 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 ETV1P50549 477 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 NAAAQ02083 359 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 GALEQ14376 348 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 DAZAP2Q15038 168 aaPredicted RBP15.15■□□□□ 0.02
CHGA-202ENST00000334654 LRRN1Q6UXK5 716 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 SLC30A7Q8NEW0 376 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 COPS4Q9BT78 406 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 SCN3BQ9NY72 215 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 ERVK-18Q9QC07 812 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 MRM2Q9UI43 246 aaKnown RBP15.15■□□□□ 0.02
CHGA-202ENST00000334654 TPRKBQ9Y3C4 175 aa15.15■□□□□ 0.02
CHGA-202ENST00000334654 DAPL1A0PJW8 107 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 IRGMA1A4Y4 181 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 TRIM64A6NGJ6 449 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 PHYHO14832 338 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 ABHD16AO95870 558 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 PTHP01270 115 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 CDK1P06493 297 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 RPSAP08865 295 aaKnown RBP15.14■□□□□ 0.01
CHGA-202ENST00000334654 HTR1AP08908 422 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 ANOS1P23352 680 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 COL8A1P27658 744 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 CHN2P52757 468 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 ACTC1P68032 377 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 ACTA1P68133 377 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 BSPH1Q075Z2 132 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 SPOCK1Q08629 439 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 ECH1Q13011 328 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 CDONQ4KMG0 1287 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 CRYBG3Q68DQ2 2970 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 KCTD18Q6PI47 426 aaPredicted RBP15.14■□□□□ 0.01
CHGA-202ENST00000334654 DEGS2Q6QHC5 323 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 NAA40Q86UY6 237 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 ZNF679Q8IYX0 411 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 RNF166Q96A37 237 aaPredicted RBP15.14■□□□□ 0.01
CHGA-202ENST00000334654 PLPPR2Q96GM1 343 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 NGBQ9NPG2 151 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 BATF3Q9NR55 127 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 INPP5EQ9NRR6 644 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 CLEC2DQ9UHP7 191 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 LRP12Q9Y561 859 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 C5orf49A4QMS7 147 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 CASKO14936 926 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 TNFAIP8O95379 198 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 APLNRP35414 380 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 WNT5AP41221 380 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 EGR3Q06889 387 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 BEX5Q5H9J7 111 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 TMEM108Q6UXF1 575 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 IPCEF1Q8WWN9 437 aaPredicted RBP15.14■□□□□ 0.01
CHGA-202ENST00000334654 HS3ST6Q96QI5 342 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 KCNJ15Q99712 375 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 ELOVL3Q9HB03 270 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 KCNN3Q9UGI6 736 aa15.14■□□□□ 0.01
CHGA-202ENST00000334654 FAM221AA4D161 298 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 ICMTO60725 284 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 SRSF10O75494 262 aaKnown RBP15.13■□□□□ 0.01
CHGA-202ENST00000334654 H2BFMP0C1H6 154 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 ACSM4P0C7M7 580 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 GDI2P50395 445 aaKnown RBP15.13■□□□□ 0.01
CHGA-202ENST00000334654 OR12D2P58182 307 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 GALK2Q01415 458 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 IRF3Q14653 427 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 RNLSQ5VYX0 342 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 PRSS45Q7RTY3 260 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 KRT77Q7Z794 578 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 STX19Q8N4C7 294 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 ZNF485Q8NCK3 441 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 IL17RDQ8NFM7 739 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 MYDGFQ969H8 173 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 TMEM204Q9BSN7 226 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 ALG8Q9BVK2 526 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 CDCA4Q9BXL8 241 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 ISG20L2Q9H9L3 353 aaKnown RBP15.13■□□□□ 0.01
CHGA-202ENST00000334654 PLEKHB1Q9UF11 243 aaPredicted RBP15.13■□□□□ 0.01
CHGA-202ENST00000334654 EXOSC1Q9Y3B2 195 aaKnown RBP15.13■□□□□ 0.01
CHGA-202ENST00000334654 CENPEQ02224 2701 aa15.13■□□□□ 0.01
CHGA-202ENST00000334654 METTL15A6NJ78 407 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 F5H5K5 113 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 ABCD4O14678 606 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 ZNF254O75437 659 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 SULT1C4O75897 302 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 DCTDP32321 178 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 PRKXP51817 358 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 GRB2P62993 217 aaKnown RBP15.12■□□□□ 0.01
CHGA-202ENST00000334654 DOC2BQ14184 412 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 TBC1D28Q2M2D7 210 aa15.12■□□□□ 0.01
CHGA-202ENST00000334654 TP53I3Q53FA7 332 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms