RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SRD5A2P31213 254 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 TAS2R20P59543 309 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 SNRPD2P62316 118 aaKnown RBP13.55□□□□□ -0.24
C9orf47-201ENST00000334490 RELAQ04206 551 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 ESCO2Q56NI9 601 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 MDGA2Q7Z553 956 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 SLCO5A1Q9H2Y9 848 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 ZCCHC4Q9H5U6 513 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 PTTG3PQ9NZH4 202 aa13.55□□□□□ -0.24
C9orf47-201ENST00000334490 E9PI62 339 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 TSPAN4O14817 238 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 CALCBP10092 127 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
C9orf47-201ENST00000334490 CAMK2BQ13554 666 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 RBMS2Q15434 407 aaKnown RBP13.54□□□□□ -0.24
C9orf47-201ENST00000334490 ELFN2Q5R3F8 820 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 TMPRSS11FQ6ZWK6 438 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 OR51A2Q8NGJ7 313 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 FAM234AQ9H0X4 552 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 DUSP21Q9H596 190 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 SPACA1Q9HBV2 294 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 SDHAF2Q9NX18 166 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 A0A1W2PPH5 198 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 CYB5BO43169 146 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 PSMB1P20618 241 aaKnown RBP13.54□□□□□ -0.24
C9orf47-201ENST00000334490 SNCAP37840 140 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 RPS19P39019 145 aaKnown RBP13.54□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF133P52736 654 aaPredicted RBP13.54□□□□□ -0.24
C9orf47-201ENST00000334490 FAM198BQ6UWH4 519 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 M1APQ8TC57 530 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 REEP6Q96HR9 211 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 SIGLEC7Q9Y286 467 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 A0A1W2PS29 197 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 RAB1AP62820 205 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 RAC1P63000 192 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF169Q14929 603 aaPredicted RBP13.54□□□□□ -0.24
C9orf47-201ENST00000334490 PCK2Q16822 640 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 PBOV1Q9GZY1 135 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 HRASLSQ9HDD0 168 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 CHST2Q9Y4C5 530 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 R4GMQ9 66 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 SCN3AQ9NY46 2000 aa13.54□□□□□ -0.24
C9orf47-201ENST00000334490 OR5H15A6NDH6 313 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 RGS11O94810 467 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 JUNBP17275 347 aaPredicted RBP13.53□□□□□ -0.24
C9orf47-201ENST00000334490 RNPS1Q15287 305 aaKnown RBP13.53□□□□□ -0.24
C9orf47-201ENST00000334490 OR10D3Q8NH80 312 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 C20orf141Q9NUB4 165 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 IL20Q9NYY1 176 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 TUSC2O75896 110 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 WNT1P04628 370 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 CNR1P21554 472 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 TGM4P49221 684 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 STEAP1BQ6NZ63 245 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 MFFQ9GZY8 342 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 SLCO1C1Q9NYB5 712 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 NINQ8N4C6 2090 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 MEIOCA2RUB1 952 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 GPR137BO60478 399 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 NKX2-5P52952 324 aaPredicted RBP13.53□□□□□ -0.24
C9orf47-201ENST00000334490 SOX8P57073 446 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 RDH5Q92781 318 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 DVL3Q92997 716 aaPredicted RBP13.53□□□□□ -0.24
C9orf47-201ENST00000334490 SNX18Q96RF0 628 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 CYR61O00622 381 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF728P0DKX0 622 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 LPCAT3Q6P1A2 487 aa13.53□□□□□ -0.24
C9orf47-201ENST00000334490 GTPBP8Q8N3Z3 284 aaPredicted RBP13.53□□□□□ -0.24
C9orf47-201ENST00000334490 BOLA2-SMG1P6H3BVE0 249 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 M0QYG6 137 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 SSX5O60225 188 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 LILRB5O75023 590 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 MT-CO2P00403 227 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 SP9P0CG40 484 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 GLRA1P23415 457 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 PEBP1P30086 187 aaKnown RBP13.52□□□□□ -0.24
C9orf47-201ENST00000334490 ARF1P84077 181 aaKnown RBP13.52□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF141Q15928 474 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF573Q86YE8 665 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 C1orf87Q8N0U7 546 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 SLC25A45Q8N413 288 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 OR56B4Q8NH76 319 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 ATP6V1G1O75348 118 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 PNLIPP16233 465 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF121P58317 390 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-201ENST00000334490 CDK5R1Q15078 307 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 SPATA46Q5T0L3 261 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.24
C9orf47-201ENST00000334490 OR1J1Q8NGS3 322 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 OR13C5Q8NGS8 318 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 KIRREL1Q96J84 757 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 NTN4Q9HB63 628 aa13.52□□□□□ -0.24
C9orf47-201ENST00000334490 IMPA2O14732 288 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 PSG6Q00889 435 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 TATDN3Q17R31 274 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 PRELID3BQ9Y3B1 194 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 HTR2AP28223 471 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 LTBRP36941 435 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 AQP6Q13520 282 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms