RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 NUP210Q8TEM1 1887 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 TRBV11-1A0A0K0K1C0 115 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 TRDCB7Z8K6 153 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 COCHO43405 550 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 GMFGO60234 142 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 GLSO94925 669 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-201ENST00000328923 IGSF6O95976 241 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 PNPP00491 289 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 GCGP01275 180 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 APODP05090 189 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 DCNP07585 359 aaKnown RBP10.68□□□□□ -0.7
SHMT2-201ENST00000328923 CTSLP07711 333 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 PSMB6P28072 239 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 SNCAP37840 140 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 SULT1A2P50226 295 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF311Q5JNZ3 666 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 FAHD2BQ6P2I3 314 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-201ENST00000328923 LHFPL4Q7Z7J7 247 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 FAM160A2Q8N612 972 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-201ENST00000328923 C12orf76Q8N812 135 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-201ENST00000328923 OR9A4Q8NGU2 314 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 HLA-CQ95604 372 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 FAHD2AQ96GK7 314 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF764Q96H86 408 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-201ENST00000328923 NRIP3Q9NQ35 241 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 A0A087WV62 115 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF840PA6NDX5 716 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 TSPAN15O95858 294 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 GBAP04062 536 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 FOXK1P85037 733 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 MIDNQ504T8 468 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 RTL6Q6ICC9 239 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 SLC22A25Q6T423 547 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 DNM1P46Q6ZS02 220 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 FAM219AQ8IW50 185 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 TMEM183AQ8IXX5 376 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF615Q8N8J6 731 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 BHLHE23Q8NDY6 225 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 NUDT11Q96G61 164 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 PRO3102Q9H379 93 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 NELFAQ9H3P2 528 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 KCNJ16Q9NPI9 418 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 INPP5EQ9NRR6 644 aa10.68□□□□□ -0.7
SHMT2-201ENST00000328923 LTBP2Q14767 1821 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 C13orf42A0A1B0GVH6 325 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 H0YIZ8 118 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 K7ERQ8 282 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 SYT7O43581 403 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 NME2P1O60361 137 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 TBL1XO60907 577 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 SLC16A8O95907 504 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 PPBPP02775 128 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 SOD2P04179 222 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 KLK1P06870 262 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 HMGA1P17096 107 aaKnown RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 AKT2P31751 481 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 FRKP42685 505 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 SLC6A9P48067 706 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 RAB7AP51149 207 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 TAS2R43P59537 309 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 C1orf194Q5T5A4 169 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 AADACL3Q5VUY0 350 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 RPL7L1Q6DKI1 246 aaKnown RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 OR8G2PQ6IF36 304 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 MTSS1LQ765P7 747 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 TMCO2Q7Z6W1 182 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 LYG1Q8N1E2 194 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 OR13D1Q8NGV5 346 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 SMARCD2Q92925 531 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 RAB8BQ92930 207 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 OTUB2Q96DC9 234 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 VPS25Q9BRG1 176 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 HCAR1Q9BXC0 346 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 SLC17A9Q9BYT1 436 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 BCL2L10Q9HD36 194 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 NOX4Q9NPH5 578 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 ST6GALNAC2Q9UJ37 374 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 PITPNC1Q9UKF7 332 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 A0A087WUU8 490 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 KIR2DL5BA0A0G2JN68 375 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 KIR2DL5BA0A0G2JPC4 375 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 M0QYG6 137 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 TK1P04183 234 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 RAB40ALP0C0E4 278 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 SPINT3P49223 89 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 RPS11P62280 158 aaKnown RBP eCLIP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 EBPQ15125 230 aaKnown RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 STEAP1BQ6NZ63 245 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 S100A7AQ86SG5 101 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 KIR2DL5AQ8N109 375 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 WFDC12Q8WWY7 111 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 RAB40AQ8WXH6 277 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 HAS2Q92819 552 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 UBE2E3Q969T4 207 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF689Q96CS4 500 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 GNRHR2Q96P88 292 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 INTS14Q96SY0 518 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 ALKBH7Q9BT30 221 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-201ENST00000328923 TAF9BQ9HBM6 251 aa10.67□□□□□ -0.7
SHMT2-201ENST00000328923 GSKIPQ9P0R6 139 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms