RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	WIF1	Q9Y5W5	379 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	DOPEY2	Q9Y3R5	2298 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	MTCL1	Q9Y4B5	1905 aa	Known RBP	10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	IGHV5-10-1	A0A0J9YXX1	117 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	MEX3A	A1L020	520 aa	Known RBP	10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	AGPAT2	O15120	278 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	ALX3	O95076	343 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	IL11	P20809	199 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	NPY4R	P50391	375 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	CLDN15	P56746	228 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	D2HGDH	Q8N465	521 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	FAM109A	Q8N4B1	249 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	CMBL	Q96DG6	245 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	ZNF764	Q96H86	408 aa	Predicted RBP	10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	MAP6	Q96JE9	813 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	DDO	Q99489	341 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	CDC6	Q99741	560 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	OR14J1	Q9UGF5	321 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	GDF2	Q9UK05	429 aa	Predicted RBP	10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	B3GALT5	Q9Y2C3	310 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	MEMO1	Q9Y316	297 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	CAD	P27708	2225 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	TMEM82	A0PJX8	343 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771		H3BMH7	237 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	BET1	O15155	118 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	APOC3	P02656	99 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	CD46	P15529	392 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	OPRM1	P35372	400 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	FAP	Q12884	760 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	CPT1C	Q8TCG5	803 aa		10.64	□□□□□ -0.71
DDR1-223	ENST00000324771	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.64	□□□□□ -0.71
DDR1-223	ENST00000324771		F5H5P2	479 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	AIP	O00170	330 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	TIAF1	O95411	115 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	CD3D	P04234	171 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	RPA2	P15927	270 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	RFX2	P48378	723 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	HNF4G	Q14541	408 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	LTC4S	Q16873	150 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	MEST	Q5EB52	335 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	OR5AS1	Q8N127	324 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	OR4K15	Q8NH41	348 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	OTOS	Q8NHW6	89 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	RASL10B	Q96S79	203 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	UQCC2	Q9BRT2	126 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	RNF32	Q9H0A6	362 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	LOC100289279	A0A1B0GTE1	492 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771		B8ZZF3	427 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	TGFBR3L	H3BV60	316 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	SGCE	O43556	437 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	ANGPTL7	O43827	346 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	THY1	P04216	161 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	AGFG1	P52594	562 aa	Known RBP	10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	TAS2R19	P59542	299 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	AIMP2	Q13155	320 aa	Known RBP	10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	ASAH1	Q13510	395 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	C5orf46	Q6UWT4	87 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	C17orf107	Q6ZR85	190 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	ATG4D	Q86TL0	474 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	ADGRG3	Q86Y34	549 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	GJC3	Q8NFK1	279 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	OR4S1	Q8NGB4	309 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	OR52B4	Q8NGK2	314 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	HAVCR1	Q96D42	359 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	AIFM2	Q9BRQ8	373 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	TAS2R3	Q9NYW6	316 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	UBQLN2	Q9UHD9	624 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771		A0A1B0GTQ1	180 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	EIF1B	O60739	113 aa	Known RBP	10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	FAH	P16930	419 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	FGF9	P31371	208 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	APLNR	P35414	380 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	RAD52	P43351	418 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	CCR9	P51686	369 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	TAF9	Q16594	264 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	CPNE2	Q96FN4	548 aa	Predicted RBP	10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	C20orf85	Q9H1P6	137 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	MIXL1	Q9H2W2	232 aa		10.63	□□□□□ -0.71
DDR1-223	ENST00000324771	ZNF35	P13682	527 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	EPHA1	P21709	976 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	THBS2	P35442	1172 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	RGS19	P49795	217 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	DLX5	P56178	289 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	SPINK14	Q6IE38	97 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	FAM122C	Q6P4D5	195 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	TMEM91	Q6ZNR0	172 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	OR6M1	Q8NGM8	313 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	OR6F1	Q8NGZ6	308 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	ZNF501	Q96CX3	271 aa	Predicted RBP	10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	OR8B4	Q96RC9	309 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	JAM3	Q9BX67	310 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	MFRP	Q9BY79	579 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	EMC3	Q9P0I2	261 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	MYLK	Q15746	1914 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771		A0A1W2PR80	420 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	TCRBV16S1A1N1	A0A5B0	115 aa		10.62	□□□□□ -0.71
DDR1-223	ENST00000324771	ZNF121	P58317	390 aa	Predicted RBP	10.62	□□□□□ -0.71

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