RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 LIPAP38571 399 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 CENPAP49450 140 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 LSM6P62312 80 aaKnown RBP10.38□□□□□ -0.75
TPM3-204ENST00000323144 UBA52P62987 128 aaKnown RBP10.38□□□□□ -0.75
TPM3-204ENST00000323144 ARMCX4Q5H9R4 360 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 OR2T2Q6IF00 324 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 LEG1Q6P5S2 330 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 SMARCD3Q6STE5 483 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 USP43Q70EL4 1123 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 RRM2BQ7LG56 351 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 ZER1Q7Z7L7 766 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 C1orf174Q8IYL3 243 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 SPICQ8N5J4 248 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 SDR9C7Q8NEX9 313 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 FAM216AQ8WUB2 273 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 MEGF10Q96KG7 1140 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 DUX5Q96PT3 197 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 ELAC2Q9BQ52 826 aaKnown RBP10.38□□□□□ -0.75
TPM3-204ENST00000323144 FAM107BQ9H098 131 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 OR52D1Q9H346 318 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 EFCAB1Q9HAE3 211 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
TPM3-204ENST00000323144 DCAF13Q9NV06 445 aaKnown RBP10.38□□□□□ -0.75
TPM3-204ENST00000323144 ATPIF1Q9UII2 106 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 SAMD4AQ9UPU9 718 aaKnown RBP10.38□□□□□ -0.75
TPM3-204ENST00000323144 AURKCQ9UQB9 309 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
TPM3-204ENST00000323144 IGHV3OR16-10A0A075B7F0 116 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 F5H5P2 479 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 TRIM77I1YAP6 450 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 AHCYL1O43865 530 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 FOXH1O75593 365 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 ZNF12P17014 697 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 GATA3P23771 443 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 COMPP49747 757 aaPredicted RBP10.37□□□□□ -0.75
TPM3-204ENST00000323144 HIST1H3AP68431 136 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 KCNMB1Q16558 191 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 TMEM155Q4W5P6 130 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 HSP90B2PQ58FF3 399 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 FAM201AQ5SY85 155 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 HIST2H3PS2Q5TEC6 136 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 GLYATQ6IB77 296 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 FBXW12Q6X9E4 464 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 DPY19L2P2Q6ZN68 376 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 HIST2H3AQ71DI3 136 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 BCL6BQ8N143 479 aaPredicted RBP10.37□□□□□ -0.75
TPM3-204ENST00000323144 TEX29Q8N6K0 151 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 SIGLECL1Q8N7X8 197 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 SLC26A10Q8NG04 563 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 NANPQ8TBE9 248 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 HAVCR1Q96D42 359 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 SAMD8Q96LT4 415 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 C1orf147Q96MC9 270 aaPredicted RBP10.37□□□□□ -0.75
TPM3-204ENST00000323144 ZNF48Q96MX3 618 aaPredicted RBP10.37□□□□□ -0.75
TPM3-204ENST00000323144 ERMAPQ96PL5 475 aaPredicted RBP10.37□□□□□ -0.75
TPM3-204ENST00000323144 NMNAT3Q96T66 252 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 COQ7Q99807 217 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 WACQ9BTA9 647 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 RBM4Q9BWF3 364 aaKnown RBP10.37□□□□□ -0.75
TPM3-204ENST00000323144 HDHD2Q9H0R4 259 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 GCM1Q9NP62 436 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 RPRD1BQ9NQG5 326 aaKnown RBP10.37□□□□□ -0.75
TPM3-204ENST00000323144 ADA2Q9NZK5 511 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 ZNF69Q9UC07 566 aa10.37□□□□□ -0.75
TPM3-204ENST00000323144 MEGF8Q7Z7M0 2845 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 TMEM89A2RUT3 159 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 TMEM178BH3BS89 294 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 ARPC2O15144 300 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 RAC2P15153 192 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 RPS2P15880 293 aaKnown RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 HIST1H1CP16403 213 aaKnown RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 TNFRSF1AP19438 455 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 MSX2P35548 267 aaPredicted RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 MDH2P40926 338 aaKnown RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 RPS27P42677 84 aaKnown RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 RPS6KA3P51812 740 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 COX10Q12887 443 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 ZNF154Q13106 437 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 TUSC1Q2TAM9 212 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 KRTAP27-1Q3LI81 207 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 AWAT1Q58HT5 328 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 SLC18B1Q6NT16 456 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 DNM1P34Q6PK57 102 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 LYPD4Q6UWN0 246 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 ZNF620Q6ZNG0 422 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 JAZF1Q86VZ6 243 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 OR6V1Q8N148 313 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 KLHL36Q8N4N3 616 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 OR4K13Q8NH42 304 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 GCDHQ92947 438 aaPredicted RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 MED4Q9NPJ6 270 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 IL19Q9UHD0 177 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 FAM32AQ9Y421 112 aaKnown RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 INSIG2Q9Y5U4 225 aa10.36□□□□□ -0.75
TPM3-204ENST00000323144 SOX21Q9Y651 276 aaPredicted RBP10.36□□□□□ -0.75
TPM3-204ENST00000323144 TRAV40A0A0B4J280 105 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 MDFIC2A0A1B0GVS7 189 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms