RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 FGGYQ96C11 551 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 NKX3-1Q99801 234 aaPredicted RBP19.9■□□□□ 0.78
PNKP-201ENST00000322344 PRO3102Q9H379 93 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 ALPK2Q86TB3 2170 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 TUBAL3A6NHL2 446 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 L7N2F9 121 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 SYT7O43581 403 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 DKK1O94907 266 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 NFYAP23511 347 aaPredicted RBP19.9■□□□□ 0.78
PNKP-201ENST00000322344 ADH6P28332 368 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 EIF1P41567 113 aaKnown RBP19.9■□□□□ 0.78
PNKP-201ENST00000322344 P2RY4P51582 365 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 ZNF239Q16600 458 aaKnown RBP19.9■□□□□ 0.78
PNKP-201ENST00000322344 ZNF813Q6ZN06 617 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 RHOUQ7L0Q8 258 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 DVL3Q92997 716 aaPredicted RBP19.9■□□□□ 0.78
PNKP-201ENST00000322344 RASL10BQ96S79 203 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 UQCC2Q9BRT2 126 aa19.9■□□□□ 0.78
PNKP-201ENST00000322344 GDF2Q9UK05 429 aaPredicted RBP19.9■□□□□ 0.78
PNKP-201ENST00000322344 CCDC163A0A0D9SF12 145 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 LOC101059948A0A1B0GTJ6 334 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 A0A1W2PPL8 197 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 MEN1O00255 615 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 LMX1BO60663 402 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 CYB5AP00167 134 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 PGA4P0DJD7 388 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 PGA3P0DJD8 388 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 RAB14P61106 215 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 CLPPQ16740 277 aaPredicted RBP19.89■□□□□ 0.77
PNKP-201ENST00000322344 PHF19Q5T6S3 580 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 LCN10Q6JVE6 187 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 OR1M1Q8NGA1 313 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 OR4D6Q8NGJ1 314 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 ELMOD3Q96FG2 381 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 PTGES2Q9H7Z7 377 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 WDR54Q9H977 334 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 MYOZ1Q9NP98 299 aaPredicted RBP19.89■□□□□ 0.77
PNKP-201ENST00000322344 TMEM138Q9NPI0 162 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 OPN4Q9UHM6 478 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 NXT1Q9UKK6 140 aaKnown RBP19.89■□□□□ 0.77
PNKP-201ENST00000322344 ARID1BQ8NFD5 2236 aaPredicted RBP19.89■□□□□ 0.77
PNKP-201ENST00000322344 FREM3P0C091 2139 aa19.89■□□□□ 0.77
PNKP-201ENST00000322344 HMSDA8MTL9 139 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 TP53I11O14683 189 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 TRAF3IP2O43734 574 aaPredicted RBP19.88■□□□□ 0.77
PNKP-201ENST00000322344 PMS2P2O95744 297 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 CD74P04233 296 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 MUC20Q8N307 709 aaPredicted RBP19.88■□□□□ 0.77
PNKP-201ENST00000322344 SLC22A24Q8N4F4 322 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 FADS6Q8N9I5 356 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 OR4K17Q8NGC6 315 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 OR2AJ1Q8NGZ0 328 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 OR6X1Q8NH79 312 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 TNFAIP8L1Q8WVP5 186 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 OXGR1Q96P68 337 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 HDGFL3Q9Y3E1 203 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 RPS10-NUDT3A0A1W2PQS6 291 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 ZNF878C9JN71 531 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 F5H5P2 479 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 YKT6O15498 198 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 SCGNO76038 276 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 BPNT1O95861 308 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 FGF5P12034 268 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 EIF1AXP47813 144 aaKnown RBP19.88■□□□□ 0.77
PNKP-201ENST00000322344 OR10S1Q8NGN2 331 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 ELP5Q8TE02 316 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 FAM46BQ96A09 425 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 OR5B2Q96R09 309 aa19.88■□□□□ 0.77
PNKP-201ENST00000322344 OR6C65A6NJZ3 312 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 ZNF736B4DX44 427 aaPredicted RBP19.87■□□□□ 0.77
PNKP-201ENST00000322344 MCRIP1C9JLW8 97 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 ERCC1P07992 297 aaPredicted RBP19.87■□□□□ 0.77
PNKP-201ENST00000322344 CXCL2P19875 107 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 HOXA6P31267 233 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 GNALP38405 381 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 HLA-BQ31612 363 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 C4orf46Q504U0 113 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 PMS2CLQ68D20 193 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 SLC25A47Q6Q0C1 308 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 OR5D14Q8NGL3 314 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 AQP3Q92482 292 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 CNTD2Q9H8S5 307 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 FBXL2Q9UKC9 423 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 POLR1DQ9Y2S0 133 aa19.87■□□□□ 0.77
PNKP-201ENST00000322344 LOC102725191A0A1B0GVB3 256 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 MEF2DQ14814 521 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 IDO2Q6ZQW0 420 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 OR5M1Q8NGP8 315 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 EDAQ92838 391 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 ZBTB8AQ96BR9 441 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 GAL3ST1Q99999 423 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 PILRBQ9UKJ0 227 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 LHFPL6Q9Y693 200 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 LOC102723996A0A087X1L8 192 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 TMEM82A0PJX8 343 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 H3BUI4 141 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 GOSR2O14653 212 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 AMY2AP04746 511 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 RAB3AP20336 220 aa19.86■□□□□ 0.77
PNKP-201ENST00000322344 CLDN6P56747 220 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms