RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FABP9Q0Z7S8 132 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 NUDCD2Q8WVJ2 157 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 SLC25A32Q9H2D1 315 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 IGHV3-64DA0A0J9YX35 117 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 BCAT2O15382 392 aaPredicted RBP13.81□□□□□ -0.2
VARS2-201ENST00000321897 NME2P1O60361 137 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 ALOX12BO75342 701 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 SPP1P10451 314 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 GABRR1P24046 479 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 KIR2DL1P43626 348 aaPredicted RBP13.81□□□□□ -0.2
VARS2-201ENST00000321897 FMODQ06828 376 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 FAM57BQ71RH2 274 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 GABRG1Q8N1C3 465 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 PRRT1Q99946 306 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 ANKRD19PQ9H560 264 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 SPTY2D1-AS1A0A0U1RR47 76 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 STMND1H3BQB6 276 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 H7C417 338 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 STK17BO94768 372 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 MPZL1O95297 269 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 BAMBIQ13145 260 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 CD226Q15762 336 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 ZNF681Q96N22 645 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 SIGLEC11Q96RL6 698 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 STACQ99469 402 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 CRISPLD2Q9H0B8 497 aa13.81□□□□□ -0.2
VARS2-201ENST00000321897 FAM230AA0A1W2PPH8 454 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 NPIPB8E9PQR5 432 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 PMS2P2O95744 297 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 TBX6O95947 436 aaPredicted RBP13.8□□□□□ -0.2
VARS2-201ENST00000321897 MGMTP16455 207 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SERPINA2P20848 420 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 CDKN2AP42771 156 aaKnown RBP13.8□□□□□ -0.2
VARS2-201ENST00000321897 DIO1P49895 249 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 PSG6Q00889 435 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 GUCA2BQ16661 112 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SLC36A2Q495M3 483 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 STAC2Q6ZMT1 411 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 OR10AC1Q8NH08 325 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 TCEAL7Q9BRU2 100 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 ACACAQ13085 2346 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 A0A1W2PQF6 199 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SERTM1A2A2V5 107 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 EPOPA6NHQ4 379 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 DCTN6O00399 190 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 TMIGD3P0DMS9 266 aaPredicted RBP13.8□□□□□ -0.2
VARS2-201ENST00000321897 SDHAP31040 664 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 HSD11B2P80365 405 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 PRICKLE4Q2TBC4 344 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 CDC6Q99741 560 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SLCO1C1Q9NYB5 712 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 TAS2R4Q9NYW5 299 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 UNC80Q8N2C7 3258 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 ZNF16P17020 682 aaPredicted RBP13.8□□□□□ -0.2
VARS2-201ENST00000321897 SPINK2P20155 84 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SERPINF1P36955 418 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 ATP1B3P54709 279 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 GPR157Q5UAW9 335 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 DCAF12L2Q5VW00 463 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SCGB3A2Q96PL1 93 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SPACA1Q9HBV2 294 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 TNFRSF10CO14798 259 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 OR2T1O43869 369 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 IL33O95760 270 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 CYCSP99999 105 aaKnown RBP13.8□□□□□ -0.2
VARS2-201ENST00000321897 C4orf17Q53FE4 359 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 MRM1Q6IN84 353 aaKnown RBP13.8□□□□□ -0.2
VARS2-201ENST00000321897 ACOT7LQ6ZUV0 252 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 SFT2D1Q8WV19 159 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 PIGQQ9BRB3 760 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 CHST6Q9GZX3 395 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 OPN4Q9UHM6 478 aa13.8□□□□□ -0.2
VARS2-201ENST00000321897 TLCD2A6NGC4 264 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 NDUFB6O95139 128 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 LCATP04180 440 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 SEMG1P04279 462 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 CRYBA1P05813 215 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 ZNF44P15621 663 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 HTR2CP28335 458 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 CXCL12P48061 93 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 OVCH1Q7RTY7 1134 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 AKR1E2Q96JD6 320 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 GFOD1Q9NXC2 390 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 MIOXQ9UGB7 285 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 ZNF230Q9UIE0 474 aaPredicted RBP13.79□□□□□ -0.2
VARS2-201ENST00000321897 ZNF850A8MQ14 1090 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 NFYBP25208 207 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 ALDH3B1P43353 468 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 C21orf58P58505 322 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 NR0B2Q15466 257 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 C1orf140Q5VVS0 124 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 FAM199XQ6PEV8 388 aaPredicted RBP13.79□□□□□ -0.2
VARS2-201ENST00000321897 MEX3BQ6ZN04 569 aaKnown RBP13.79□□□□□ -0.2
VARS2-201ENST00000321897 OR5M9Q8NGP3 310 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 OR14L1PQ8NHC6 308 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 FAM213BQ8TBF2 198 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 STT3BQ8TCJ2 826 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 LURAP1Q96LR2 239 aa13.79□□□□□ -0.2
VARS2-201ENST00000321897 STEAP1Q9UHE8 339 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms